contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA1088503" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4845579 | 4845579 | PRJNA1088503_P_NODE_264_length_1352_cov_4.937264_g225_i0 | PRJNA1088503 | 264 | 1352 | 4.937264 | 66.75180928 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1533 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g225 | i0 | 99.88 | 56.3247041420118 | 834 | 0 | 98 | 1 | 21 | 853 | 16115 | 15282 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 76151 | 1533 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 4845582 | 4845582 | PRJNA1088503_P_NODE_5864_length_325_cov_31827.635135_g5492_i0 | PRJNA1088503 | 5864 | 325 | 31827.635135 | 103439.81418875 | Micrococcus | 1269 | Bacteria | Bacteria | 523 | 5.379999999999999e-144 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g5492 | i0 | 100 | 355.8 | 283 | 0 | 87 | 0 | 37 | 319 | 348264 | 348546 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 115635 | 523 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 5297345 | 5297345 | PRJNA1088503_P_NODE_945_length_908_cov_10573.125142_g832_i0 | PRJNA1088503 | 945 | 908 | 10573.125142 | 96003.97628936 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 1574 | 0 | NTclustered | gi|2790107115|gb|CP166959.1| | 1747 | g832 | i0 | 99.652 | 1.89647577092511 | 861 | 3 | 95 | 0 | 15 | 875 | 1222469 | 1221609 | Cutibacterium acnes strain CN6 chromosome, complete genome | blastn | 1722 | 1574 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 8670748 | 8670748 | PRJNA1088503_P_NODE_1827_length_681_cov_13570.429448_g1621_i0 | PRJNA1088503 | 1827 | 681 | 13570.429448 | 92414.62454088 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1147 | 0 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g1621 | i0 | 99.681 | 48.8766519823789 | 627 | 2 | 92 | 0 | 34 | 660 | 855089 | 854463 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 33285 | 1147 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 9122107 | 9122107 | PRJNA1088503_P_NODE_1208_length_823_cov_13533.468514_g1067_i0 | PRJNA1088503 | 1208 | 823 | 13533.468514 | 111380.44587022 | Actinomyces massiliensis | 461393 | Bacteria | Bacteria | 1441 | 0 | NTclustered | gi|2557556977|gb|CP128646.1| | 461393 | g1067 | i0 | 99.62 | 0.95868772782503 | 789 | 3 | 96 | 0 | 8 | 796 | 3307263 | 3308051 | Actinomyces massiliensis strain F0489 chromosome, complete genome | blastn | 789 | 1441 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces massiliensis | ||
| 12496290 | 12496290 | PRJNA1088503_P_NODE_170_length_1498_cov_147.707284_g141_i0 | PRJNA1088503 | 170 | 1498 | 147.707284 | 2212.65511432 | Cutibacterium | 1912216 | Bacteria | Bacteria | 2700 | 0 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g141 | i0 | 99.932 | 52.7389853137517 | 1465 | 1 | 98 | 0 | 22 | 1486 | 821484 | 822948 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 79003 | 2700 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 12948220 | 12948220 | PRJNA1088503_P_NODE_8911_length_218_cov_55405.296296_g8539_i0 | PRJNA1088503 | 8911 | 218 | 55405.296296 | 120783.54592528 | Mycobacterium tuberculosis | 1773 | Bacteria | Bacteria | 60.2 | 1.15e-4 | NTclustered | gi|2126371852|gb|CP085615.1| | 1773 | g8539 | i0 | 94.872 | 4.86238532110092 | 39 | 1 | 17 | 1 | 181 | 218 | 4028500 | 4028462 | Mycobacterium tuberculosis strain 253/2019 chromosome | blastn | 1060 | 60.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium tuberculosis | ||
| 14223249 | 14223249 | PRJNA1088503_P_NODE_3792_length_452_cov_11.432624_g3445_i0 | PRJNA1088503 | 3792 | 452 | 11.432624 | 51.67546048 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 809 | 0 | NTclustered | gi|966533409|gb|CP012350.1| | 1747 | g3445 | i0 | 100 | 105.008849557522 | 438 | 0 | 97 | 0 | 1 | 438 | 612320 | 612757 | Cutibacterium acnes strain PA_30_2_L1 chromosome, complete genome | blastn | 47464 | 809 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 15045202 | 15045202 | PRJNA1088503_P_NODE_9332_length_208_cov_12.692737_g8960_i0 | PRJNA1088503 | 9332 | 208 | 12.692737 | 26.40089296 | Cutibacterium | 1912216 | Bacteria | Bacteria | 331 | 2.0900000000000002e-86 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g8960 | i0 | 99.454 | 217 | 183 | 0 | 88 | 1 | 18 | 200 | 57462 | 57281 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 45136 | 331 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 15497176 | 15497176 | PRJNA1088503_P_NODE_8773_length_222_cov_47520.994819_g8401_i0 | PRJNA1088503 | 8773 | 222 | 47520.994819 | 105496.60849818 | Pseudarthrobacter defluvii | 410837 | Bacteria | Bacteria | 145 | 3.16e-30 | NTclustered | gi|2522919821|gb|CP066362.1| | 410837 | g8401 | i0 | 93.75 | 0.432432432432432 | 96 | 6 | 43 | 0 | 94 | 189 | 3348046 | 3348141 | Pseudarthrobacter defluvii strain E5 chromosome, complete genome | blastn | 96 | 145 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Pseudarthrobacter | Pseudarthrobacter defluvii | ||
| 19320284 | 19320284 | PRJNA1088503_P_NODE_8816_length_221_cov_47740.984375_g8444_i0 | PRJNA1088503 | 8816 | 221 | 47740.984375 | 105507.57546875 | Arsenicicoccus cauae | 2663847 | Bacteria | Bacteria | 243 | 1.08e-59 | NTclustered | gi|2831290308|gb|CP171001.1| | 2663847 | g8444 | i0 | 98.54 | 1.00452488687783 | 137 | 2 | 62 | 0 | 70 | 206 | 3045002 | 3044866 | Arsenicicoccus cauae strain WGS1510 chromosome, complete genome | blastn | 222 | 243 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Arsenicicoccus | Arsenicicoccus cauae | ||
| 20143885 | 20143885 | PRJNA1088503_P_NODE_6896_length_283_cov_41935.996063_g6524_i0 | PRJNA1088503 | 6896 | 283 | 41935.996063 | 118678.86885829 | Cutibacterium | 1912216 | Bacteria | Bacteria | 339 | 1.79e-88 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g6524 | i0 | 100 | 32.9787985865724 | 183 | 0 | 65 | 0 | 34 | 216 | 1833764 | 1833582 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 9333 | 339 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22694376 | 22694376 | PRJNA1088503_P_NODE_7678_length_256_cov_46936.687225_g7306_i0 | PRJNA1088503 | 7678 | 256 | 46936.687225 | 120157.919296 | Cutibacterium | 1912216 | Bacteria | Bacteria | 414 | 2.58e-111 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g7306 | i0 | 99.134 | 154.62109375 | 231 | 1 | 90 | 1 | 26 | 256 | 53362 | 53591 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 39583 | 414 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 23969892 | 23969892 | PRJNA1088503_P_NODE_7759_length_253_cov_48488.665179_g7387_i0 | PRJNA1088503 | 7759 | 253 | 48488.665179 | 122676.32290287 | Micrococcus | 1269 | Bacteria | Bacteria | 405 | 1.53e-108 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g7387 | i0 | 100 | 82.1778656126482 | 219 | 0 | 87 | 0 | 35 | 253 | 759580 | 759798 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 20791 | 405 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 25243833 | 25243833 | PRJNA1088503_P_NODE_11320_length_159_cov_1.184615_g10948_i0 | PRJNA1088503 | 11320 | 159 | 1.184615 | 1.88353785 | Cutibacterium | 1912216 | Bacteria | Bacteria | 294 | 1.98e-75 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g10948 | i0 | 100 | 103.433962264151 | 159 | 0 | 100 | 0 | 1 | 159 | 1945661 | 1945503 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 16446 | 294 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 25243837 | 25243837 | PRJNA1088503_P_NODE_5760_length_330_cov_35453.634551_g5388_i0 | PRJNA1088503 | 5760 | 330 | 35453.634551 | 116996.9940183 | Cutibacterium | 1912216 | Bacteria | Bacteria | 555 | 1.9399999999999994e-153 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g5388 | i0 | 100 | 47.1484848484848 | 300 | 0 | 91 | 0 | 8 | 307 | 565754 | 566053 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 15559 | 555 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 25243839 | 25243839 | PRJNA1088503_P_NODE_6740_length_289_cov_40616.788462_g6368_i0 | PRJNA1088503 | 6740 | 289 | 40616.788462 | 117382.51865518 | Cutibacterium | 1912216 | Bacteria | Bacteria | 473 | 4.819999999999999e-129 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g6368 | i0 | 99.615 | 251.996539792388 | 260 | 0 | 90 | 1 | 1 | 259 | 56873 | 56614 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 72827 | 473 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;