RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1087264" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1087264 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4020593 4020593 PRJNA1087264_P_NODE_11464_length_186_cov_1.744526_g11382_i0 PRJNA1087264 11464 186 1.744526 3.24481836 Spizellomyces punctatus 109760 Fungi Fungi 119 1.55e-22   NTclustered gi|1026980085|ref|XM_016752373.1| 645134 g11382 i0 82.609 28.4784946236559 138 21 74 3 1 137 316 181 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S15 (SPPG_04127), mRNA blastn 5297 119 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
4020660 4020660 PRJNA1087264_P_NODE_2424_length_430_cov_1.926509_g2343_i0 PRJNA1087264 2424 430 1.926509 8.2839887 Spizellomyces punctatus 109760 Fungi Fungi 246 1.77e-60   NTclustered gi|1026958752|ref|XM_016750497.1| 645134 g2343 i0 79.37 2.1953488372093 349 72 81 0 23 371 112 460 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S20 (SPPG_02203), mRNA blastn 944 246 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
6571894 6571894 PRJNA1087264_P_NODE_13226_length_173_cov_1.467742_g13144_i0 PRJNA1087264 13226 173 1.467742 2.53919366 Polychytrium aggregatum 110093 Fungi Fungi 148 1.7999999999999998e-31   NTclustered gi|2432171462|ref|XM_053112561.1| 110093 g13144 i0 83.133 51.7976878612717 166 24 95 4 1 164 1384 1547 Polychytrium aggregatum heat shock protein 90 kDa (BJ171DRAFT_524257), mRNA blastn 8961 148 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9121650 9121650 PRJNA1087264_P_NODE_1688_length_516_cov_3.794433_g1608_i0 PRJNA1087264 1688 516 3.794433 19.57927428 Polychytrium aggregatum 110093 Fungi Fungi 307 9.77e-79   NTclustered gi|2432149348|ref|XM_053111166.1| 110093 g1608 i0 87.132 54.1414728682171 272 34 53 1 56 327 531 261 Polychytrium aggregatum ribosomal protein S19-domain-containing protein (BJ171DRAFT_506928), mRNA blastn 27937 307 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9121677 9121677 PRJNA1087264_P_NODE_21908_length_161_cov_0.892857_g21826_i0 PRJNA1087264 21908 161 0.892857 1.43749977 Fimicolochytrium jonesii 1396493 Fungi Fungi 154 3.5600000000000004e-33   NTclustered gi|2432087517|ref|XM_053072757.1| 1396493 g21826 i0 84.568 89.2298136645963 162 17 98 5 1 158 1594 1437 Fimicolochytrium jonesii P-loop containing nucleoside triphosphate hydrolase protein (EV422DRAFT_569324), partial mRNA blastn 14366 154 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;