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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1087264" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 12 ✖

bioproject 1

  • PRJNA1087264 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1468650 1468650 PRJNA1087264_P_NODE_16622_length_165_cov_0.913793_g16540_i0 PRJNA1087264 16622 165 0.913793 1.50775845 Chlamydomonas sp. TK-1983 3056 Plants Plants 58.4 2.97e-4   NTclustered gi|174203|gb|K02345.1|CRERRA 3056 g16540 i0 100 0.187878787878788 31 0 19 0 1 31 88 118 Chlamydomonas sp. TK-1983 5S ribosomal RNA gene, complete sequence blastn 31 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. TK-1983
1468677 1468677 PRJNA1087264_P_NODE_2842_length_393_cov_1.095930_g2761_i0 PRJNA1087264 2842 393 1.09593 4.3070049 Chlorella variabilis 554065 Plants Plants 165 4.63e-36   NTclustered gi|552825916|ref|XM_005846855.1| 554065 g2761 i0 85.535 18.1221374045802 159 21 40 2 159 316 234 77 Chlorella variabilis hypothetical protein (CHLNCDRAFT_134811) mRNA, complete cds blastn 7122 165 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
4020618 4020618 PRJNA1087264_P_NODE_15004_length_167_cov_0.864407_g14922_i0 PRJNA1087264 15004 167 0.864407 1.44355969 Auxenochlorella protothecoides 3075 Plants Plants 100 4.93e-17   NTclustered gi|760444206|ref|XM_011400870.1| 3075 g14922 i0 80 4.08383233532934 135 27 81 0 1 135 774 908 Auxenochlorella protothecoides Lysine-tRNA ligase partial mRNA blastn 682 100 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
4020650 4020650 PRJNA1087264_P_NODE_20764_length_162_cov_0.902655_g20682_i0 PRJNA1087264 20764 162 0.902655 1.4623011 Ulva intestinalis 3116 Plants Plants 111 2.19e-20   NTclustered gi|148524158|gb|EF551324.1| 3116 g20682 i0 81.818 2.47530864197531 132 24 81 0 27 158 1155 1024 Ulva intestinalis elongation factor-1 alpha-like protein mRNA, partial cds blastn 401 111 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva intestinalis
4845522 4845522 PRJNA1087264_P_NODE_13264_length_173_cov_1.233871_g13182_i0 PRJNA1087264 13264 173 1.233871 2.13459683 Eukaryota 2759 Plants Plants 154 3.87e-33   NTclustered gi|926791444|ref|XM_014048742.1| 145388 g13182 i0 87.5 11.4450867052023 136 14 78 3 39 173 2308 2441 Monoraphidium neglectum adenosylhomocysteinase mRNA blastn 1980 154 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
5296855 5296855 PRJNA1087264_P_NODE_4205_length_317_cov_2.085821_g4123_i0 PRJNA1087264 4205 317 2.085821 6.61205257 Chlamydomonas reinhardtii 3055 Plants Plants 117 1.04e-21   NTclustered gi|2082253493|ref|XM_043066154.1| 3055 g4123 i0 86.667 1.40378548895899 105 14 33 0 29 133 652 756 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g405106v5), mRNA blastn 445 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5296900 5296900 PRJNA1087264_P_NODE_7745_length_226_cov_1.248588_g7663_i0 PRJNA1087264 7745 226 1.248588 2.82180888 Monoraphidium neglectum 145388 Plants Plants 111 3.27e-20   NTclustered gi|926770371|ref|XM_014038206.1| 145388 g7663 i0 86.275 4.80530973451327 102 14 45 0 1 102 147 46 Monoraphidium neglectum solute carrier family 25 partial mRNA blastn 1086 111 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
10397322 10397322 PRJNA1087264_P_NODE_11909_length_183_cov_1.074627_g11827_i0 PRJNA1087264 11909 183 1.074627 1.96656741 Chlamydomonas reinhardtii 3055 Plants Plants 150 5.37e-32   NTclustered gi|2082260397|ref|XM_043068042.1| 3055 g11827 i0 90.351 21.568306010929 114 11 62 0 65 178 525 412 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g498600v5), mRNA blastn 3947 150 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
14222824 14222824 PRJNA1087264_P_NODE_8132_length_221_cov_1.313953_g8050_i0 PRJNA1087264 8132 221 1.313953 2.90383613 Chlamydomonas reinhardtii 3055 Plants Plants 254 5e-63   NTclustered gi|167449|gb|M11448.1|CRETBA2A 3055 g8050 i0 87.33 97.3665158371041 221 28 100 0 1 221 1159 1379 Chlamydomonas reinhardtii alpha-2 tubulin gene, complete cds blastn 21518 254 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
15496680 15496680 PRJNA1087264_P_NODE_15913_length_166_cov_0.871795_g15831_i0 PRJNA1087264 15913 166 0.871795 1.4471797 Monoraphidium neglectum 145388 Plants Plants 130 6.240000000000001e-26   NTclustered gi|926789746|ref|XM_014047893.1| 145388 g15831 i0 80.838 78.1265060240964 167 30 100 2 1 166 1011 846 Monoraphidium neglectum lysyl-tRNA synthetase, class II partial mRNA blastn 12969 130 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
20595131 20595131 PRJNA1087264_P_NODE_2437_length_429_cov_1.855263_g2356_i0 PRJNA1087264 2437 429 1.855263 7.95907827 Volvox carteri 3067 Plants Plants 331 4.750000000000001e-86   NTclustered gi|302849325|ref|XM_002956147.1| 3068 g2356 i0 81.01 57.3659673659674 416 79 97 0 12 427 1404 989 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_110003), mRNA blastn 24610 331 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
21419461 21419461 PRJNA1087264_P_NODE_1597_length_531_cov_2.331950_g1518_i0 PRJNA1087264 1597 531 2.33195 12.3826545 Eukaryota 2759 Plants Plants 350 1.65e-91   NTclustered gi|2082260161|ref|XM_001690941.2| 3055 g1518 i0 82.353 58.3389830508475 408 66 76 6 14 418 145 549 Chlamydomonas reinhardtii ribosomal protein S23 (CHLRE_12g504200v5), mRNA blastn 30978 350 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;