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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1086823" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA1086823 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
193616 193616 PRJNA1086823_P_NODE_10241_length_270_cov_1.583756_g10124_i0 PRJNA1086823 10241 270 1.583756 4.2761412 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 383 7.73e-102   NTclustered gi|291001094|ref|XM_002683068.1| 5762 g10124 i0 92.222 1.52222222222222 270 21 100 0 1 270 616 885 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_37149), mRNA blastn 411 383 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
1468526 1468526 PRJNA1086823_P_NODE_6502_length_320_cov_1.263158_g6385_i0 PRJNA1086823 6502 320 1.263158 4.0421056 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 296 1.26e-75   NTclustered gi|290989396|ref|XM_002677278.1| 5762 g6385 i0 83.591 4.809375 323 45 99 7 1 319 126 444 Naegleria gruberi translation initiation factor eIF-5A family protein (NAEGRDRAFT_67422), partial mRNA blastn 1539 296 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2744457 2744457 PRJNA1086823_P_NODE_1683_length_575_cov_2.850598_g1568_i0 PRJNA1086823 1683 575 2.850598 16.3909385 Naegleria jamiesoni 36335 Heterolobosea other_Eukaryota 1044 0   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g1568 i0 99.304 97.2660869565217 575 4 100 0 1 575 1758 1184 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 55928 1044 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
4020228 4020228 PRJNA1086823_P_NODE_11544_length_257_cov_1.614130_g11427_i0 PRJNA1086823 11544 257 1.61413 4.1483141 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 52.8 0.023   NTclustered gi|2124399356|ref|XM_044698631.1| 51637 g11427 i0 100 0.108949416342412 28 0 11 0 171 198 858 885 Naegleria lovaniensis uncharacterized protein (C9374_008543), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
4020403 4020403 PRJNA1086823_P_NODE_19384_length_241_cov_4.589286_g19267_i0 PRJNA1086823 19384 241 4.589286 11.06017926 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 318 1.94e-82   NTclustered gi|291000659|ref|XM_002682851.1| 5762 g19267 i0 91.102 3.61410788381743 236 20 98 1 7 241 11 246 Naegleria gruberi profilin (NAEGRDRAFT_34873), mRNA blastn 871 318 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9945593 9945593 PRJNA1086823_P_NODE_4988_length_356_cov_6.024735_g4871_i0 PRJNA1086823 4988 356 6.024735 21.4480566 Naegleria 5761 Heterolobosea other_Eukaryota 586 7.469999999999998e-163   NTclustered gi|2618963742|gb|OR769034.1| 5762 g4871 i0 96.348 11.1348314606742 356 13 100 0 1 356 5440 5795 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3964 586 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11672417 11672417 PRJNA1086823_P_NODE_16630_length_246_cov_0.901734_g16513_i0 PRJNA1086823 16630 246 0.901734 2.21826564 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 344 3.27e-90   NTclustered gi|290988943|ref|XM_002677084.1| 5762 g16513 i0 92.181 20.4471544715447 243 19 99 0 1 243 1039 1281 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36687), mRNA blastn 5030 344 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12947519 12947519 PRJNA1086823_P_NODE_18531_length_243_cov_0.917647_g18414_i0 PRJNA1086823 18531 243 0.917647 2.22988221 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 294 3.3e-75   NTclustered gi|290985340|ref|XM_002675338.1| 5762 g18414 i0 88.525 6.0082304526749 244 27 100 1 1 243 489 246 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82670), mRNA blastn 1460 294 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14222587 14222587 PRJNA1086823_P_NODE_5472_length_343_cov_0.866667_g5355_i0 PRJNA1086823 5472 343 0.866667 2.97266781 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 496 1.25e-135   NTclustered gi|11466174|ref|NC_002573.1| 5762 g5355 i0 92.711 15.3644314868805 343 25 100 0 1 343 48275 48617 Naegleria gruberi mitochondrion, complete genome blastn 5270 496 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15045119 15045119 PRJNA1086823_P_NODE_9612_length_276_cov_1.536946_g9495_i0 PRJNA1086823 9612 276 1.536946 4.24197096 Naegleria 5761 Heterolobosea other_Eukaryota 392 1.32e-104   NTclustered gi|290988433|ref|XM_002676880.1| 5762 g9495 i0 92.701 46.518115942029 274 16 99 4 1 272 1088 1359 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82621), mRNA blastn 12839 394 0.99492385786802 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21870531 21870531 PRJNA1086823_P_NODE_14678_length_249_cov_0.886364_g14561_i0 PRJNA1086823 14678 249 0.886364 2.20704636 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 340 4.29e-89   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g14561 i0 91.498 3.98393574297189 247 21 99 0 3 249 2467 2221 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 992 340 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;