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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1086823" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1086823 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4020557 4020557 PRJNA1086823_P_NODE_8924_length_283_cov_1.485714_g8807_i0 PRJNA1086823 8924 283 1.485714 4.20457062 Rhynchobodo sp. Hamilton Lake 266815 Euglenozoa other_Eukaryota 424 4.8e-114   NTclustered gi|45739055|gb|AY490213.1| 266815 g8807 i0 93.684 83.0530035335689 285 14 99 4 1 282 29 312 Rhynchobodo sp. Hamilton Lake 18S ribosomal RNA gene, partial sequence blastn 23504 424 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Rhynchobodo Rhynchobodo sp. Hamilton Lake
5296478 5296478 PRJNA1086823_P_NODE_1465_length_616_cov_2.071823_g1351_i0 PRJNA1086823 1465 616 2.071823 12.76242968 Rhynchobodo sp. Hamilton Lake 266815 Euglenozoa other_Eukaryota 893 0   NTclustered gi|45739055|gb|AY490213.1| 266815 g1351 i0 92.777 83.4204545454545 623 36 100 8 1 616 1267 647 Rhynchobodo sp. Hamilton Lake 18S ribosomal RNA gene, partial sequence blastn 51387 893 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Rhynchobodo Rhynchobodo sp. Hamilton Lake
15496425 15496425 PRJNA1086823_P_NODE_1713_length_568_cov_2.092929_g1598_i0 PRJNA1086823 1713 568 2.092929 11.88783672 Decastava edaphica 1732396 Euglenozoa other_Eukaryota 1009 0   NTclustered gi|1182637171|gb|KY963138.1| 1732396 g1598 i0 98.768 40.5492957746479 568 6 100 1 1 568 13 579 Decastava edaphica strain CCAP 1265/2 small subunit ribosomal RNA gene, partial sequence blastn 23032 1009 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava edaphica
15496488 15496488 PRJNA1086823_P_NODE_3253_length_426_cov_3.079320_g3136_i0 PRJNA1086823 3253 426 3.07932 13.1179032 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 532 1.1999999999999999e-146   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g3136 i0 92.147 141.24882629108 382 23 89 5 1 381 4333 4708 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 60172 532 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
18045371 18045371 PRJNA1086823_P_NODE_11515_length_257_cov_1.853261_g11398_i0 PRJNA1086823 11515 257 1.853261 4.76288077 Rhynchobodo sp. Hamilton Lake 266815 Euglenozoa other_Eukaryota 329 9.64e-86   NTclustered gi|45739055|gb|AY490213.1| 266815 g11398 i0 90.272 83.8832684824903 257 18 99 7 1 255 1684 1935 Rhynchobodo sp. Hamilton Lake 18S ribosomal RNA gene, partial sequence blastn 21558 329 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Rhynchobodo Rhynchobodo sp. Hamilton Lake
19319468 19319468 PRJNA1086823_P_NODE_1576_length_593_cov_1.909615_g1461_i0 PRJNA1086823 1576 593 1.909615 11.32401695 Decastava sp. 3023511 Euglenozoa other_Eukaryota 922 0   NTclustered gi|2431695564|gb|OQ331009.1| 3023511 g1461 i0 94.667 20.7976391231029 600 22 100 10 1 593 630 1226 Decastava sp. isolate SPO2 small subunit ribosomal RNA gene, partial sequence blastn 12333 922 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava sp.
20143768 20143768 PRJNA1086823_P_NODE_19736_length_199_cov_6.309524_g19619_i0 PRJNA1086823 19736 199 6.309524 12.55595276 Trypanosoma 5690 Euglenozoa other_Eukaryota 228 2.6699999999999992e-55   NTclustered gi|162233|gb|M63699.1|TRBRGS1 5693 g19619 i0 87.5 123.572864321608 200 22 100 3 1 199 64 261 T.cruzi S3 ribosomal RNA gene blastn 24591 228 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
23146026 23146026 PRJNA1086823_P_NODE_3039_length_438_cov_1.950685_g2922_i0 PRJNA1086823 3039 438 1.950685 8.5440003 Decastava edaphica 1732396 Euglenozoa other_Eukaryota 780 0   NTclustered gi|937541987|gb|KP306753.1| 1732396 g2922 i0 98.858 70.0388127853881 438 3 100 2 1 438 1980 1545 Decastava edaphica strain CCAP 1265/2 18S ribosomal RNA gene, partial sequence blastn 30677 780 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava edaphica
25243772 25243772 PRJNA1086823_P_NODE_9900_length_273_cov_2.330000_g9783_i0 PRJNA1086823 9900 273 2.33 6.3609 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 270 6.359999999999999e-68   NTclustered gi|226347430|gb|FJ807255.1| 5718 g9783 i0 84.758 99.5164835164835 269 41 99 0 1 269 201 469 Herpetomonas muscarum strain ATCC 30260 elongation factor 1 alpha gene, partial cds blastn 27168 272 0.992647058823529 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Herpetomonas Herpetomonas muscarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;