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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA1086823" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA1086823 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2744607 2744607 PRJNA1086823_P_NODE_6343_length_323_cov_4.136000_g6226_i0 PRJNA1086823 6343 323 4.136 13.35928 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 272 2.14e-68   NTclustered gi|33327399|gb|AF527985.1| 151077 g6226 i0 99.333 68.5170278637771 150 1 46 0 121 270 1 150 Chilodonella uncinata clone 5 histone H4 (H4) gene, partial cds blastn 22131 272 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
5296660 5296660 PRJNA1086823_P_NODE_565_length_965_cov_4.431614_g479_i0 PRJNA1086823 565 965 4.431614 42.7650751 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1448 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g479 i0 96.879 44.099481865285 865 27 90 0 101 965 1205 341 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 42556 1448 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
6571526 6571526 PRJNA1086823_P_NODE_1066_length_729_cov_2.679878_g958_i0 PRJNA1086823 1066 729 2.679878 19.53631062 Tetmemena sp. Y1 1640447 SAR_Eukaryotes SAR_Eukaryotes 351 6.42e-92   NTclustered gi|1227052606|gb|KY038460.1| 1640447 g958 i0 80.931 44.159122085048 451 80 61 5 2 449 1191 1638 Tetmemena sp. Y1 heat shock protein 70 (hsp70) gene, partial cds; macronuclear blastn 32192 351 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Tetmemena Tetmemena sp. Y1
6571701 6571701 PRJNA1086823_P_NODE_2166_length_510_cov_2.453089_g2049_i0 PRJNA1086823 2166 510 2.453089 12.5107539 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 824 0   NTclustered gi|110645006|gb|DQ665938.1| 151077 g2049 i0 96.047 11.6882352941176 506 20 99 0 5 510 717 212 Chilodonella uncinata actin gene, partial cds; macronuclear blastn 5961 824 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
6571809 6571809 PRJNA1086823_P_NODE_7686_length_298_cov_1.026667_g7569_i0 PRJNA1086823 7686 298 1.026667 3.05946766 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 401 2.3899999999999992e-107   NTclustered gi|347439275|gb|JN111986.1| 151077 g7569 i0 99.103 94.489932885906 223 2 75 0 76 298 930 708 Chilodonella uncinata strain USA_WH clone SP2 beta tubulin (btub) gene, partial cds; macronuclear blastn 28158 401 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9121448 9121448 PRJNA1086823_P_NODE_19288_length_242_cov_0.923077_g19171_i0 PRJNA1086823 19288 242 0.923077 2.23384634 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 281 2.55e-71   NTclustered gi|397140904|gb|JN565725.1| 151077 g19171 i0 99.355 1.04545454545455 155 1 100 0 88 242 1502 1656 Chilodonella uncinata strain ATCC PRA-256 cell-line CLG eukaryotic translation initiation factor 2 gamma gene, partial cds; micronuclear blastn 253 281 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
10397209 10397209 PRJNA1086823_P_NODE_5029_length_355_cov_1.258865_g4912_i0 PRJNA1086823 5029 355 1.258865 4.46897075 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 651 0   NTclustered gi|300521444|gb|GQ377690.1| 151077 g4912 i0 99.718 1.53239436619718 355 1 100 0 1 355 205 559 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 544 651 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
11672477 11672477 PRJNA1086823_P_NODE_19730_length_202_cov_4.325581_g19613_i0 PRJNA1086823 19730 202 4.325581 8.73767362 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 300 5.69e-77   NTclustered gi|110277428|gb|DQ662856.1| 151077 g19613 i0 93.532 0.995049504950495 201 13 99 0 1 201 1414 1614 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 201 300 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
11672548 11672548 PRJNA1086823_P_NODE_5510_length_342_cov_1.156134_g5393_i0 PRJNA1086823 5510 342 1.156134 3.95397828 Sterkiella nova 200597 SAR_Eukaryotes SAR_Eukaryotes 248 3.84e-61   NTclustered gi|1051275|gb|U37280.1|ONU37280 200597 g5393 i0 79.942 91.5204678362573 344 63 99 6 1 341 1452 1792 Oxytricha nova Hsp70 gene, complete cds blastn 31300 248 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella nova
12947377 12947377 PRJNA1086823_P_NODE_1211_length_687_cov_2.986971_g1098_i0 PRJNA1086823 1211 687 2.986971 20.52049077 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1142 0   NTclustered gi|300676719|gb|GQ377693.1| 151077 g1098 i0 96.652 44.5633187772926 687 23 100 0 1 687 13 699 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 30615 1142 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15496505 15496505 PRJNA1086823_P_NODE_4073_length_386_cov_5.530351_g3956_i0 PRJNA1086823 4073 386 5.530351 21.34715486 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 658 0   NTclustered gi|301014695|gb|GQ377692.1| 151077 g3956 i0 97.409 63.020725388601 386 10 100 0 1 386 397 12 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 24326 658 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
20143775 20143775 PRJNA1086823_P_NODE_3296_length_424_cov_17.470085_g3179_i0 PRJNA1086823 3296 424 17.470085 74.0731604 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 342 2.16e-89   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g3179 i0 97.97 51.6132075471698 197 4 46 0 228 424 3082 2886 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 21884 342 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
20594733 20594733 PRJNA1086823_P_NODE_1277_length_665_cov_3.932432_g1164_i0 PRJNA1086823 1277 665 3.932432 26.1506728 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1101 0   NTclustered gi|300676719|gb|GQ377693.1| 151077 g1164 i0 96.541 46.1112781954887 665 23 100 0 1 665 677 13 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 30664 1101 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
21419434 21419434 PRJNA1086823_P_NODE_4757_length_363_cov_1.500000_g4640_i0 PRJNA1086823 4757 363 1.5 5.445 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.01   NTclustered gi|390988043|gb|JN885111.1| 35097 g4640 i0 100 0.636363636363636 29 0 8 0 228 256 1675 1703 Cohnilembus verminus isolate FXP2009051101 large subunit ribsomal RNA gene, partial sequence blastn 231 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Cohnilembidae Cohnilembus Cohnilembus verminus
21870758 21870758 PRJNA1086823_P_NODE_7638_length_298_cov_2.942222_g7521_i0 PRJNA1086823 7638 298 2.942222 8.76782156 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 459 1.4000000000000002e-124   NTclustered gi|110645063|gb|DQ665311.1| 151077 g7521 i0 98.833 24.1778523489933 257 3 99 0 42 298 997 741 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 7205 459 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23146025 23146025 PRJNA1086823_P_NODE_2979_length_442_cov_2.631436_g2862_i0 PRJNA1086823 2979 442 2.631436 11.63094712 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 795 0   NTclustered gi|110644972|gb|DQ665918.1| 151077 g2862 i0 99.095 97.6968325791855 442 4 100 0 1 442 222 663 Chilodonella uncinata clone 1 beta-tubulin gene, partial cds blastn 43182 795 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23146027 23146027 PRJNA1086823_P_NODE_3099_length_434_cov_8.684211_g2982_i0 PRJNA1086823 3099 434 8.684211 37.68947574 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 776 0   NTclustered gi|300676714|gb|GQ377691.1| 151077 g2982 i0 99.301 52.4055299539171 429 3 99 0 6 434 450 22 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 22744 776 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;