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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA1086823" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 20 ✖

bioproject 1

  • PRJNA1086823 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
193616 193616 PRJNA1086823_P_NODE_10241_length_270_cov_1.583756_g10124_i0 PRJNA1086823 10241 270 1.583756 4.2761412 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 383 7.73e-102   NTclustered gi|291001094|ref|XM_002683068.1| 5762 g10124 i0 92.222 1.52222222222222 270 21 100 0 1 270 616 885 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_37149), mRNA blastn 411 383 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
1468526 1468526 PRJNA1086823_P_NODE_6502_length_320_cov_1.263158_g6385_i0 PRJNA1086823 6502 320 1.263158 4.0421056 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 296 1.26e-75   NTclustered gi|290989396|ref|XM_002677278.1| 5762 g6385 i0 83.591 4.809375 323 45 99 7 1 319 126 444 Naegleria gruberi translation initiation factor eIF-5A family protein (NAEGRDRAFT_67422), partial mRNA blastn 1539 296 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2744457 2744457 PRJNA1086823_P_NODE_1683_length_575_cov_2.850598_g1568_i0 PRJNA1086823 1683 575 2.850598 16.3909385 Naegleria jamiesoni 36335 Heterolobosea other_Eukaryota 1044 0   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g1568 i0 99.304 97.2660869565217 575 4 100 0 1 575 1758 1184 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 55928 1044 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
4020228 4020228 PRJNA1086823_P_NODE_11544_length_257_cov_1.614130_g11427_i0 PRJNA1086823 11544 257 1.61413 4.1483141 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 52.8 0.023   NTclustered gi|2124399356|ref|XM_044698631.1| 51637 g11427 i0 100 0.108949416342412 28 0 11 0 171 198 858 885 Naegleria lovaniensis uncharacterized protein (C9374_008543), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
4020403 4020403 PRJNA1086823_P_NODE_19384_length_241_cov_4.589286_g19267_i0 PRJNA1086823 19384 241 4.589286 11.06017926 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 318 1.94e-82   NTclustered gi|291000659|ref|XM_002682851.1| 5762 g19267 i0 91.102 3.61410788381743 236 20 98 1 7 241 11 246 Naegleria gruberi profilin (NAEGRDRAFT_34873), mRNA blastn 871 318 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4020557 4020557 PRJNA1086823_P_NODE_8924_length_283_cov_1.485714_g8807_i0 PRJNA1086823 8924 283 1.485714 4.20457062 Rhynchobodo sp. Hamilton Lake 266815 Euglenozoa other_Eukaryota 424 4.8e-114   NTclustered gi|45739055|gb|AY490213.1| 266815 g8807 i0 93.684 83.0530035335689 285 14 99 4 1 282 29 312 Rhynchobodo sp. Hamilton Lake 18S ribosomal RNA gene, partial sequence blastn 23504 424 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Rhynchobodo Rhynchobodo sp. Hamilton Lake
5296478 5296478 PRJNA1086823_P_NODE_1465_length_616_cov_2.071823_g1351_i0 PRJNA1086823 1465 616 2.071823 12.76242968 Rhynchobodo sp. Hamilton Lake 266815 Euglenozoa other_Eukaryota 893 0   NTclustered gi|45739055|gb|AY490213.1| 266815 g1351 i0 92.777 83.4204545454545 623 36 100 8 1 616 1267 647 Rhynchobodo sp. Hamilton Lake 18S ribosomal RNA gene, partial sequence blastn 51387 893 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Rhynchobodo Rhynchobodo sp. Hamilton Lake
9945593 9945593 PRJNA1086823_P_NODE_4988_length_356_cov_6.024735_g4871_i0 PRJNA1086823 4988 356 6.024735 21.4480566 Naegleria 5761 Heterolobosea other_Eukaryota 586 7.469999999999998e-163   NTclustered gi|2618963742|gb|OR769034.1| 5762 g4871 i0 96.348 11.1348314606742 356 13 100 0 1 356 5440 5795 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3964 586 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11672417 11672417 PRJNA1086823_P_NODE_16630_length_246_cov_0.901734_g16513_i0 PRJNA1086823 16630 246 0.901734 2.21826564 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 344 3.27e-90   NTclustered gi|290988943|ref|XM_002677084.1| 5762 g16513 i0 92.181 20.4471544715447 243 19 99 0 1 243 1039 1281 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36687), mRNA blastn 5030 344 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12947519 12947519 PRJNA1086823_P_NODE_18531_length_243_cov_0.917647_g18414_i0 PRJNA1086823 18531 243 0.917647 2.22988221 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 294 3.3e-75   NTclustered gi|290985340|ref|XM_002675338.1| 5762 g18414 i0 88.525 6.0082304526749 244 27 100 1 1 243 489 246 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82670), mRNA blastn 1460 294 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14222587 14222587 PRJNA1086823_P_NODE_5472_length_343_cov_0.866667_g5355_i0 PRJNA1086823 5472 343 0.866667 2.97266781 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 496 1.25e-135   NTclustered gi|11466174|ref|NC_002573.1| 5762 g5355 i0 92.711 15.3644314868805 343 25 100 0 1 343 48275 48617 Naegleria gruberi mitochondrion, complete genome blastn 5270 496 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15045119 15045119 PRJNA1086823_P_NODE_9612_length_276_cov_1.536946_g9495_i0 PRJNA1086823 9612 276 1.536946 4.24197096 Naegleria 5761 Heterolobosea other_Eukaryota 392 1.32e-104   NTclustered gi|290988433|ref|XM_002676880.1| 5762 g9495 i0 92.701 46.518115942029 274 16 99 4 1 272 1088 1359 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82621), mRNA blastn 12839 394 0.99492385786802 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15496425 15496425 PRJNA1086823_P_NODE_1713_length_568_cov_2.092929_g1598_i0 PRJNA1086823 1713 568 2.092929 11.88783672 Decastava edaphica 1732396 Euglenozoa other_Eukaryota 1009 0   NTclustered gi|1182637171|gb|KY963138.1| 1732396 g1598 i0 98.768 40.5492957746479 568 6 100 1 1 568 13 579 Decastava edaphica strain CCAP 1265/2 small subunit ribosomal RNA gene, partial sequence blastn 23032 1009 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava edaphica
15496488 15496488 PRJNA1086823_P_NODE_3253_length_426_cov_3.079320_g3136_i0 PRJNA1086823 3253 426 3.07932 13.1179032 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 532 1.1999999999999999e-146   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g3136 i0 92.147 141.24882629108 382 23 89 5 1 381 4333 4708 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 60172 532 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
18045371 18045371 PRJNA1086823_P_NODE_11515_length_257_cov_1.853261_g11398_i0 PRJNA1086823 11515 257 1.853261 4.76288077 Rhynchobodo sp. Hamilton Lake 266815 Euglenozoa other_Eukaryota 329 9.64e-86   NTclustered gi|45739055|gb|AY490213.1| 266815 g11398 i0 90.272 83.8832684824903 257 18 99 7 1 255 1684 1935 Rhynchobodo sp. Hamilton Lake 18S ribosomal RNA gene, partial sequence blastn 21558 329 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Rhynchobodo Rhynchobodo sp. Hamilton Lake
19319468 19319468 PRJNA1086823_P_NODE_1576_length_593_cov_1.909615_g1461_i0 PRJNA1086823 1576 593 1.909615 11.32401695 Decastava sp. 3023511 Euglenozoa other_Eukaryota 922 0   NTclustered gi|2431695564|gb|OQ331009.1| 3023511 g1461 i0 94.667 20.7976391231029 600 22 100 10 1 593 630 1226 Decastava sp. isolate SPO2 small subunit ribosomal RNA gene, partial sequence blastn 12333 922 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava sp.
20143768 20143768 PRJNA1086823_P_NODE_19736_length_199_cov_6.309524_g19619_i0 PRJNA1086823 19736 199 6.309524 12.55595276 Trypanosoma 5690 Euglenozoa other_Eukaryota 228 2.6699999999999992e-55   NTclustered gi|162233|gb|M63699.1|TRBRGS1 5693 g19619 i0 87.5 123.572864321608 200 22 100 3 1 199 64 261 T.cruzi S3 ribosomal RNA gene blastn 24591 228 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
21870531 21870531 PRJNA1086823_P_NODE_14678_length_249_cov_0.886364_g14561_i0 PRJNA1086823 14678 249 0.886364 2.20704636 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 340 4.29e-89   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g14561 i0 91.498 3.98393574297189 247 21 99 0 3 249 2467 2221 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 992 340 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
23146026 23146026 PRJNA1086823_P_NODE_3039_length_438_cov_1.950685_g2922_i0 PRJNA1086823 3039 438 1.950685 8.5440003 Decastava edaphica 1732396 Euglenozoa other_Eukaryota 780 0   NTclustered gi|937541987|gb|KP306753.1| 1732396 g2922 i0 98.858 70.0388127853881 438 3 100 2 1 438 1980 1545 Decastava edaphica strain CCAP 1265/2 18S ribosomal RNA gene, partial sequence blastn 30677 780 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava edaphica
25243772 25243772 PRJNA1086823_P_NODE_9900_length_273_cov_2.330000_g9783_i0 PRJNA1086823 9900 273 2.33 6.3609 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 270 6.359999999999999e-68   NTclustered gi|226347430|gb|FJ807255.1| 5718 g9783 i0 84.758 99.5164835164835 269 41 99 0 1 269 201 469 Herpetomonas muscarum strain ATCC 30260 elongation factor 1 alpha gene, partial cds blastn 27168 272 0.992647058823529 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Herpetomonas Herpetomonas muscarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;