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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1086823" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA1086823 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6120547 6120547 PRJNA1086823_P_NODE_8525_length_287_cov_1.457944_g8408_i0 PRJNA1086823 8525 287 1.457944 4.18429928 Bacteria 2 Bacteria Bacteria 411 3.8e-110   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g8408 i0 92.491 116.285714285714 293 13 100 9 1 287 800495 800784 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 33374 411 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
7846555 7846555 PRJNA1086823_P_NODE_5687_length_338_cov_0.962264_g5570_i0 PRJNA1086823 5687 338 0.962264 3.25245232 Candidatus Mycosynbacter amalyticus 2665156 Bacteria Bacteria 254 8.15e-63   NTclustered gi|1799615131|gb|CP045921.1| 2665156 g5570 i0 83.895 3.08579881656805 267 41 79 2 12 277 88023 87758 Candidatus Mycosynbacter amalyticus isolate JR1 chromosome, complete genome blastn 1043 254 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Mycosynbacter Candidatus Mycosynbacter amalyticus
21870505 21870505 PRJNA1086823_P_NODE_13338_length_251_cov_0.876404_g13221_i0 PRJNA1086823 13338 251 0.876404 2.19977404 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 182 2.78e-41   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g13221 i0 92.857 1.51394422310757 126 8 50 1 50 174 279777 279902 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 380 182 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
21870651 21870651 PRJNA1086823_P_NODE_2558_length_476_cov_1.905707_g2441_i0 PRJNA1086823 2558 476 1.905707 9.07116532 Candidatus Mycosynbacter amalyticus 2665156 Bacteria Bacteria 773 0   NTclustered gi|1799615131|gb|CP045921.1| 2665156 g2441 i0 96.008 122.264705882353 476 18 100 1 1 476 222746 222272 Candidatus Mycosynbacter amalyticus isolate JR1 chromosome, complete genome blastn 58198 773 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Mycosynbacter Candidatus Mycosynbacter amalyticus
23145907 23145907 PRJNA1086823_P_NODE_14739_length_249_cov_0.886364_g14622_i0 PRJNA1086823 14739 249 0.886364 2.20704636 Candidatus Nanosynbacter sp. HMT-348_TM7c-JB 2933970 Bacteria Bacteria 455 1.47e-123   NTclustered gi|2179907571|gb|CP090820.1| 2933970 g14622 i0 99.598 1.2610441767068299 249 1 100 0 1 249 337185 336937 MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome blastn 314 455 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-348_TM7c-JB
23969813 23969813 PRJNA1086823_P_NODE_859_length_810_cov_2.348711_g757_i0 PRJNA1086823 859 810 2.348711 19.0245591 Bacteria 2 Bacteria Bacteria 1168 0   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g757 i0 92.743 106.771604938272 813 52 100 7 1 810 799589 800397 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 86485 1173 0.995737425404945 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;