RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1085664" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1085664 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
193572 193572 PRJNA1085664_S_NODE_33241_length_155_cov_1.258929_g32822_i0 PRJNA1085664 33241 155 1.258929 1.95133995 Malassezia restricta 76775 Fungi Fungi 270 3.23e-68   NTclustered gi|1546632162|ref|XM_027627741.1| 76775 g32822 i0 98.065 1 155 3 100 0 1 155 2105 2259 Malassezia restricta heat shock 70kDa protein 4 (MRET_1114), partial mRNA blastn 155 270 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
2744243 2744243 PRJNA1085664_S_NODE_24423_length_178_cov_1.555556_g24004_i0 PRJNA1085664 24423 178 1.555556 2.76888968 Suillus luteus 5384 Fungi Fungi 52.8 0.015   NTclustered gi|998623171|emb|LN999935.1| 5384 g24004 i0 100 0.157303370786517 28 0 16 0 151 178 30 3 Suillus luteus mRNA for Isocitrate lyase (ICL gene), isolate sp9 blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Suillaceae Suillus Suillus luteus
4020139 4020139 PRJNA1085664_S_NODE_30984_length_160_cov_1.153846_g30565_i0 PRJNA1085664 30984 160 1.153846 1.8461536 Malassezia restricta 76775 Fungi Fungi 285 1.2e-72   NTclustered gi|1546635837|ref|XM_027629561.1| 76775 g30565 i0 98.75 1 160 2 100 0 1 160 1299 1140 Malassezia restricta tyrosyl-tRNA synthetase (MRET_2934), partial mRNA blastn 160 285 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
6571427 6571427 PRJNA1085664_S_NODE_21166_length_190_cov_1.918367_g20747_i0 PRJNA1085664 21166 190 1.918367 3.6448973 Psilocybe cubensis 181762 Fungi Fungi 145 2.6199999999999997e-30   NTclustered gi|2234837769|ref|XM_047887730.1| 181762 g20747 i0 87.805 8.63157894736842 123 15 65 0 1 123 469 591 Psilocybe cubensis uncharacterized protein (JR316_0001932), partial mRNA blastn 1640 145 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Strophariaceae Psilocybe Psilocybe cubensis
10396823 10396823 PRJNA1085664_S_NODE_13289_length_238_cov_2.548718_g12870_i0 PRJNA1085664 13289 238 2.548718 6.06594884 Hericium alpestre 135208 Fungi Fungi 56.5 0.002   NTclustered gi|2489641794|ref|NC_073556.1| 135208 g12870 i0 96.97 0.714285714285714 33 1 14 0 31 63 27974 27942 Hericium alpestre mitochondrion, complete genome blastn 170 56.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Hericiaceae Hericium Hericium alpestre
16770501 16770501 PRJNA1085664_S_NODE_26594_length_171_cov_2.601562_g26175_i0 PRJNA1085664 26594 171 2.601562 4.44867102 Rhizopogon vinicolor 80600 Fungi Fungi 54.7 0.004   NTclustered gi|1693287358|ref|NC_042699.1| 80600 g26175 i0 87.5 0.280701754385965 48 4 28 2 92 139 75156 75201 Rhizopogon vinicolor mitochondrion, complete genome blastn 48 54.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Rhizopogonaceae Rhizopogon Rhizopogon vinicolor
17595119 17595119 PRJNA1085664_S_NODE_19634_length_197_cov_1.220779_g19215_i0 PRJNA1085664 19634 197 1.220779 2.40493463 Agaricomycetes 155619 Fungi Fungi 198 2.07e-46   NTclustered gi|636627976|ref|XM_008046932.1| 717944 g19215 i0 84.772 52.5380710659898 197 30 100 0 1 197 385 581 Trametes versicolor FP-101664 SS1 manganese superoxide dismutase (TRAVEDRAFT_175708), partial mRNA blastn 10350 198 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes versicolor

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;