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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1085664" and tax_clade = "Sar"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

bioproject 1

  • PRJNA1085664 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6571389 6571389 PRJNA1085664_S_NODE_11726_length_254_cov_0.734597_g11307_i0 PRJNA1085664 11726 254 0.73459700000000006 1.86587638 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g11307 i0 100 0.114173228346457 29 0 11 0 226 254 38 10 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
10396852 10396852 PRJNA1085664_S_NODE_19449_length_198_cov_0.916129_g19030_i0 PRJNA1085664 19449 198 0.916129 1.81393542 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g19030 i0 100 0.292929292929293 30 0 15 0 1 30 9 38 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 58 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
19319229 19319229 PRJNA1085664_S_NODE_12476_length_246_cov_1.738916_g12057_i0 PRJNA1085664 12476 246 1.738916 4.27773336 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g12057 i0 100 0.467479674796748 30 0 12 0 217 246 41 12 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 115 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
19319342 19319342 PRJNA1085664_S_NODE_4216_length_405_cov_19.149171_g3798_i0 PRJNA1085664 4216 405 19.149171 77.55414255 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.039   NTclustered gi|2742502725|gb|PP905714.1| 447216 g3798 i0 100 0.138271604938272 28 0 7 0 378 405 1225 1198 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
21870381 21870381 PRJNA1085664_S_NODE_25218_length_176_cov_0.812030_g24799_i0 PRJNA1085664 25218 176 0.81203 1.4291728 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.015   NTclustered gi|2742502725|gb|PP905714.1| 447216 g24799 i0 100 0.318181818181818 28 0 16 0 149 176 1225 1198 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;