RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1082072" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1082072 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
193192 193192 PRJNA1082072_P_NODE_61_length_1102_cov_5.476190_g58_i0 PRJNA1082072 61 1102 5.47619 60.3476138 Asplanchna brightwellii 2005548 Rotifera other_Eukaryota 359 5.9e-94   NTclustered gi|2899343712|gb|PQ788833.1| 2005548 g58 i0 77.508 30.2486388384755 658 109 58 35 9 651 2406 1773 Asplanchna brightwellii chromosome I mitochondrion, complete sequence blastn 33334 359 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna brightwellii
2292522 2292522 PRJNA1082072_P_NODE_2602_length_245_cov_1.343023_g2595_i0 PRJNA1082072 2602 245 1.343023 3.29040635 Ploima 84394 Rotifera other_Eukaryota 250 7.31e-62   NTclustered gi|1227482247|gb|KX495815.1| 104777 g2595 i0 86.207 85.5387755102041 232 31 94 1 8 238 234 3 Brachionus calyciflorus isolate GQ11 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 20957 252 0.992063492063492 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;