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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1082072" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA1082072 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
193191 193191 PRJNA1082072_P_NODE_601_length_406_cov_2.057057_g594_i0 PRJNA1082072 601 406 2.057057 8.35165142 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 739 0   NTclustered gi|300676714|gb|GQ377691.1| 151077 g594 i0 99.507 53.2709359605911 406 2 100 0 1 406 429 24 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 21628 739 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
1467759 1467759 PRJNA1082072_P_NODE_242_length_616_cov_1.012891_g235_i0 PRJNA1082072 242 616 1.012891 6.23940856 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 983 0   NTclustered gi|300676719|gb|GQ377693.1| 151077 g235 i0 95.455 49.4107142857143 616 28 100 0 1 616 647 32 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 30437 983 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
2743892 2743892 PRJNA1082072_P_NODE_1023_length_338_cov_1.743396_g1016_i0 PRJNA1082072 1023 338 1.743396 5.89267848 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 547 3.339999999999999e-151   NTclustered gi|300676714|gb|GQ377691.1| 151077 g1016 i0 95.858 43.5887573964497 338 14 100 0 1 338 376 39 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 14733 547 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
5295973 5295973 PRJNA1082072_P_NODE_1945_length_259_cov_0.844086_g1938_i0 PRJNA1082072 1945 259 0.844086 2.18618274 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 200 7.959999999999999e-47   NTclustered gi|300521444|gb|GQ377690.1| 151077 g1938 i0 89.375 0.617760617760618 160 15 61 2 34 192 213 371 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 160 200 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
5295979 5295979 PRJNA1082072_P_NODE_685_length_389_cov_1.218354_g678_i0 PRJNA1082072 685 389 1.218354 4.73939706 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 315 4.29e-81   NTclustered gi|829100487|ref|XM_001007447.3| 312017 g678 i0 81.378 73.2519280205656 392 67 100 5 1 389 1865 1477 Tetrahymena thermophila SB210 transitional endoplasmic reticulum ATPase, putative partial mRNA blastn 28495 315 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
6571088 6571088 PRJNA1082072_P_NODE_2466_length_247_cov_0.885057_g2459_i0 PRJNA1082072 2466 247 0.885057 2.18609079 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 329 9.21e-86   NTclustered gi|300521444|gb|GQ377690.1| 151077 g2459 i0 90.688 10.7085020242915 247 23 100 0 1 247 736 490 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 2645 329 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9120812 9120812 PRJNA1082072_P_NODE_568_length_414_cov_2.258065_g561_i0 PRJNA1082072 568 414 2.258065 9.3483891 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 592 1.9e-164   NTclustered gi|110645063|gb|DQ665311.1| 151077 g561 i0 97.143 48.012077294686 350 10 85 0 1 350 856 1205 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 19877 592 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15495821 15495821 PRJNA1082072_P_NODE_1853_length_265_cov_1.333333_g1846_i0 PRJNA1082072 1853 265 1.333333 3.53333245 Tetmemena sp. Y1 1640447 SAR_Eukaryotes SAR_Eukaryotes 346 9.92e-91   NTclustered gi|1710560089|gb|MN207909.1| 1640447 g1846 i0 90.189 1.59622641509434 265 26 100 0 1 265 291 27 Tetmemena sp. Y1 catalase gene, partial cds; macronuclear blastn 423 346 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Tetmemena Tetmemena sp. Y1
19318919 19318919 PRJNA1082072_P_NODE_1796_length_269_cov_1.571429_g1789_i0 PRJNA1082072 1796 269 1.571429 4.22714401 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 387 5.95e-103   NTclustered gi|110645063|gb|DQ665311.1| 151077 g1789 i0 97.768 26.7955390334572 224 5 83 0 7 230 224 1 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 7208 387 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19318921 19318921 PRJNA1082072_P_NODE_216_length_637_cov_1.546099_g209_i0 PRJNA1082072 216 637 1.546099 9.84865063 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1016 0   NTclustered gi|110645006|gb|DQ665938.1| 151077 g209 i0 95.447 12.8147566718995 637 29 100 0 1 637 735 99 Chilodonella uncinata actin gene, partial cds; macronuclear blastn 8163 1016 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
20594229 20594229 PRJNA1082072_P_NODE_357_length_504_cov_1.440835_g350_i0 PRJNA1082072 357 504 1.440835 7.2618084 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 854 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g350 i0 97.222 32.2222222222222 504 14 100 0 1 504 897 394 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 16240 854 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23969617 23969617 PRJNA1082072_P_NODE_979_length_343_cov_0.855556_g972_i0 PRJNA1082072 979 343 0.855556 2.93455708 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 407 6.0099999999999995e-109   NTclustered gi|759083387|gb|KM222018.1| 200607 g972 i0 88.047 98.9912536443149 343 41 100 0 1 343 504 162 Tetmemena pustulata voucher JJM2009041401 alpha-tubulin gene, partial cds blastn 33954 407 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia pustulata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;