RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1082072" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1082072 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2743900 2743900 PRJNA1082072_P_NODE_1843_length_266_cov_1.269430_g1836_i0 PRJNA1082072 1843 266 1.26943 3.3766838 Naumovozyma castellii 27288 Fungi Fungi 54.7 0.007   NTclustered gi|366997020|ref|XM_003678225.1| 27288 g1836 i0 96.875 0.120300751879699 32 1 12 0 141 172 830 861 Naumovozyma castellii uncharacterized protein (NCAS0I02630), partial mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Naumovozyma Naumovozyma castellii
4019742 4019742 PRJNA1082072_P_NODE_1284_length_305_cov_1.991379_g1277_i0 PRJNA1082072 1284 305 1.991379 6.07370595 Australozyma saopauloensis 291208 Fungi Fungi 209 1.59e-49   NTclustered gi|2675365576|ref|XM_063022690.1| 291208 g1277 i0 84.689 60.1672131147541 209 32 69 0 97 305 865 657 [Candida] saopauloensis uncharacterized protein (PUMCH_003732), partial mRNA blastn 18351 209 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Metschnikowiaceae Australozyma Australozyma saopauloensis
4019743 4019743 PRJNA1082072_P_NODE_1324_length_301_cov_2.250000_g1317_i0 PRJNA1082072 1324 301 2.25 6.7725 Scopulariopsis gossypii 1870864 Fungi Fungi 237 7.210000000000001e-58   NTclustered gi|1042853349|gb|KU523859.1| 1870864 g1317 i0 82.593 83.0398671096346 270 45 89 2 7 275 611 343 Scopulariopsis gossypii strain HJC001 translation elongation factor-1 alpha (EF1a) gene, partial cds blastn 24995 237 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Microascales Microascaceae Scopulariopsis Scopulariopsis gossypii
14221925 14221925 PRJNA1082072_P_NODE_1792_length_270_cov_0.873096_g1785_i0 PRJNA1082072 1792 270 0.873096 2.3573592 Alternaria alternata 5599 Fungi Fungi 483 7.409999999999998e-132   NTclustered gi|1070551003|ref|XM_018525014.1| 5599 g1785 i0 98.889 46.2185185185185 270 3 100 0 1 270 1117 848 Alternaria alternata WD40 repeat-like protein mRNA blastn 12479 483 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
14221929 14221929 PRJNA1082072_P_NODE_2692_length_244_cov_0.900585_g2685_i0 PRJNA1082072 2692 244 0.900585 2.1974274 Trichoderma reesei 51453 Fungi Fungi 191 4.47e-44   NTclustered gi|589100802|ref|XM_006962362.1| 431241 g2685 i0 91.367 56.6270491803279 139 12 57 0 96 234 520 658 Trichoderma reesei QM6a elongation factor 2 (tef2), mRNA blastn 13817 191 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma reesei
17594970 17594970 PRJNA1082072_P_NODE_2254_length_249_cov_0.875000_g2247_i0 PRJNA1082072 2254 249 0.875 2.17875 Bipolaris 33194 Fungi Fungi 207 4.54e-49   NTclustered gi|628211461|ref|XM_007715065.1| 930089 g2247 i0 82.041 2.94779116465863 245 42 98 2 1 244 244 1 Bipolaris zeicola 26-R-13 uncharacterized protein (COCCADRAFT_37613), partial mRNA blastn 734 207 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Bipolaris Bipolaris zeicola
18044926 18044926 PRJNA1082072_P_NODE_1375_length_295_cov_2.018018_g1368_i0 PRJNA1082072 1375 295 2.018018 5.9531531 Candida jiufengensis 497108 Fungi Fungi 316 8.789999999999998e-82   NTclustered gi|2325097674|ref|XM_051764167.1| 497108 g1368 i0 86.348 212.11186440678 293 36 99 4 1 291 519 229 Candida jiufengensis ubi4 (KGF54_003565), partial mRNA blastn 62573 316 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida jiufengensis
20594235 20594235 PRJNA1082072_P_NODE_997_length_341_cov_0.861940_g990_i0 PRJNA1082072 997 341 0.86194 2.9392154 Sodiomyces alcalophilus 398408 Fungi Fungi 126 1.87e-24   NTclustered gi|2897696258|ref|XM_071021278.1| 591952 g990 i0 75.185 2.87096774193548 270 65 79 2 3 271 352 620 Sodiomyces alcalophilus JCM 7366 uncharacterized protein (ACRALDRAFT_2042716), partial mRNA blastn 979 126 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Plectosphaerellaceae Sodiomyces Sodiomyces alcalophilus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;