RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1078753" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1078753 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
192422 192422 PRJNA1078753_P_NODE_14261_length_312_cov_1.803347_g14065_i0 PRJNA1078753 14261 312 1.803347 5.62644264 Linderina pennispora 61395 Fungi Fungi 134 1.01e-26   NTclustered gi|2028320914|ref|XM_040889768.1| 61395 g14065 i0 80.46 1.98076923076923 174 34 56 0 9 182 975 802 Linderina pennispora elongation factor 1-gamma (DL89DRAFT_284190), partial mRNA blastn 618 134 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
19318178 19318178 PRJNA1078753_P_NODE_16356_length_296_cov_1.381166_g16160_i0 PRJNA1078753 16356 296 1.381166 4.08825136 Kickxella alabastrina 61397 Fungi Fungi 167 9.41e-37   NTclustered gi|2324013105|ref|XM_051535771.1| 61397 g16160 i0 84.848 2.5777027027027 165 25 56 0 92 256 78 242 Kickxella alabastrina ribosomal protein S28e (BX661DRAFT_181678), mRNA blastn 763 167 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
21869242 21869242 PRJNA1078753_P_NODE_14618_length_309_cov_4.381356_g14422_i0 PRJNA1078753 14618 309 4.381356 13.53839004 Linderina pennispora 61395 Fungi Fungi 224 5.78e-54   NTclustered gi|2028323422|ref|XM_040888081.1| 61395 g14422 i0 89.714 4.60517799352751 175 18 57 0 126 300 485 311 Linderina pennispora 60S ribosomal protein L37a (DL89DRAFT_268921), mRNA blastn 1423 224 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;