RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1078753" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1078753 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2743299 2743299 PRJNA1078753_P_NODE_31723_length_248_cov_0.880000_g31527_i0 PRJNA1078753 31723 248 0.88 2.1824 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.006   NTclustered gi|2794954546|ref|XM_067875855.1| 2049356 g31527 i0 100 0.229838709677419 29 0 12 0 162 190 3816 3788 Monocercomonoides exilis uncharacterized protein (MONOS_5684), partial mRNA blastn 57 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
4019019 4019019 PRJNA1078753_P_NODE_17024_length_291_cov_2.059633_g16828_i0 PRJNA1078753 17024 291 2.059633 5.99353203 uncultured Oxymonadida sp. 413579 Preaxostyla other_Eukaryota 200 9.1e-47   NTclustered gi|119117134|gb|DQ925208.1| 413579 g16828 i0 80.072 11.0137457044674 276 49 94 6 19 291 414 142 Unidentified Oxymonadida clone R21 alpha-tubulin (Atub) mRNA, partial cds blastn 3205 200 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida     uncultured Oxymonadida sp.
5295511 5295511 PRJNA1078753_P_NODE_8225_length_382_cov_1.116505_g8029_i0 PRJNA1078753 8225 382 1.116505 4.2650491 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 65.8 4.68e-6   NTclustered gi|2794979185|ref|XM_067865533.1| 2049356 g8029 i0 79.592 0.329842931937173 98 14 26 6 13 110 3021 3112 Monocercomonoides exilis uncharacterized protein (MONOS_12877), partial mRNA blastn 126 65.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
16769532 16769532 PRJNA1078753_P_NODE_27274_length_251_cov_0.865169_g27078_i0 PRJNA1078753 27274 251 0.865169 2.17157419 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 60.2 1.36e-4   NTclustered gi|2794965549|ref|XM_067875292.1| 2049356 g27078 i0 94.737 0.151394422310757 38 2 15 0 205 242 1689 1652 Monocercomonoides exilis uncharacterized protein (MONOS_5167), partial mRNA blastn 38 60.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;