RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1078753" and tax_phylum = "Nematomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1078753 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
192717 192717 PRJNA1078753_P_NODE_8381_length_379_cov_1.509804_g8185_i0 PRJNA1078753 8381 379 1.509804 5.72215716 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 209 2.03e-49   NTclustered gi|2733955602|ref|XM_065462260.1| 3053472 g8185 i0 79.412 13.1873350923483 306 55 80 5 3 304 20 321 PREDICTED: Gordionus sp. m RMFG-2023 histone H4 (LOC135926394), mRNA blastn 4998 209 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
4019214 4019214 PRJNA1078753_P_NODE_4224_length_502_cov_1.496503_g4028_i0 PRJNA1078753 4224 502 1.496503 7.51244506 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 291 9.55e-74   NTclustered gi|2733953645|ref|XM_065461292.1| 3053472 g4028 i0 80.789 22.1474103585657 380 65 75 8 107 482 123 498 PREDICTED: Gordionus sp. m RMFG-2023 small ribosomal subunit protein uS11 (LOC135925801), mRNA blastn 11118 291 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;