RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA1078753" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 31 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1078753 · 31 ✖

analysis 1

  • blastn · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
192444 192444 PRJNA1078753_P_NODE_17021_length_291_cov_2.146789_g16825_i0 PRJNA1078753 17021 291 2.146789 6.24715599 Ylistrum balloti 509963 Mollusca Mollusca 161 4.29e-35   NTclustered gi|2592056487|ref|XM_060207488.1| 509963 g16825 i0 78.439 61.4089347079038 269 43 91 11 15 280 103 359 PREDICTED: Ylistrum balloti histone H3.3A (LOC132543934), mRNA blastn 17870 161 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
192481 192481 PRJNA1078753_P_NODE_21801_length_271_cov_1.434343_g21605_i0 PRJNA1078753 21801 271 1.434343 3.88706953 Mytilus trossulus 6551 Mollusca Mollusca 161 3.96e-35   NTclustered gi|2694104023|ref|XM_063587674.1| 6551 g21605 i0 82.967 39.6309963099631 182 28 66 3 22 201 423 243 PREDICTED: Mytilus trossulus ras-related C3 botulinum toxin substrate 1 (LOC134724569), transcript variant X2, mRNA blastn 10740 161 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
192497 192497 PRJNA1078753_P_NODE_23461_length_264_cov_2.806283_g23265_i0 PRJNA1078753 23461 264 2.806283 7.40858712 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.007   NTclustered gi|2913001816|dbj|AP039609.1| 145626 g23265 i0 100 0.321969696969697 29 0 11 0 58 86 25025484 25025456 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 28, sequence blastn 85 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
1467175 1467175 PRJNA1078753_P_NODE_32582_length_248_cov_0.880000_g32386_i0 PRJNA1078753 32582 248 0.88 2.1824 Ylistrum balloti 509963 Mollusca Mollusca 56.5 0.002   NTclustered gi|2592065436|ref|XM_060212346.1| 509963 g32386 i0 100 0.233870967741935 30 0 12 0 36 65 536 507 PREDICTED: Ylistrum balloti acanthoscurrin-2-like (LOC132548479), mRNA blastn 58 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
2743240 2743240 PRJNA1078753_P_NODE_24583_length_260_cov_1.545455_g24387_i0 PRJNA1078753 24583 260 1.545455 4.018183 Ruditapes philippinarum 129788 Mollusca Mollusca 93.5 1.4e-14   NTclustered gi|2616665528|ref|XM_060750695.1| 129788 g24387 i0 77.246 3.43846153846154 167 32 63 6 94 257 236 73 PREDICTED: Ruditapes philippinarum glucosidase 2 subunit beta-like (LOC132758978), partial mRNA blastn 894 93.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
4018993 4018993 PRJNA1078753_P_NODE_12764_length_326_cov_0.924901_g12568_i0 PRJNA1078753 12764 326 0.924901 3.01517726 Trigonochlamys imitatrix 2742883 Mollusca Mollusca 195 4.81e-45   NTclustered gi|1865527613|gb|MT596793.1| 2742883 g12568 i0 84.896 57.0276073619632 192 29 59 0 1 192 243 52 Trigonochlamys imitatrix voucher ZMH86297-1704 histone 4 (H4) gene, partial cds blastn 18591 195 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Trigonochlamydidae Trigonochlamys Trigonochlamys imitatrix
4019171 4019171 PRJNA1078753_P_NODE_36524_length_245_cov_0.895349_g36328_i0 PRJNA1078753 36524 245 0.895349 2.19360505 Mytilus trossulus 6551 Mollusca Mollusca 54.7 0.006   NTclustered gi|2693978461|ref|XM_063543995.1| 6551 g36328 i0 100 0.118367346938776 29 0 12 0 20 48 932 904 PREDICTED: Mytilus trossulus GTPase IMAP family member 4-like (LOC134684687), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
7845120 7845120 PRJNA1078753_P_NODE_13487_length_319_cov_1.252033_g13291_i0 PRJNA1078753 13487 319 1.252033 3.99398527 Littorina saxatilis 31220 Mollusca Mollusca 69.4 2.97e-7   NTclustered gi|2868610424|ref|XM_070346807.1| 31220 g13291 i0 100 9.41692789968652 37 0 12 0 283 319 1427 1391 PREDICTED: Littorina saxatilis tubulin beta chain (LOC138974109), mRNA blastn 3004 69.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
9120115 9120115 PRJNA1078753_P_NODE_18668_length_284_cov_1.398104_g18472_i0 PRJNA1078753 18668 284 1.398104 3.97061536 Mytilus californianus 6549 Mollusca Mollusca 348 2.99e-91   NTclustered gi|2334678274|ref|XM_052237254.1| 6549 g18472 i0 92.308 87.5140845070423 247 15 86 1 1 243 6731 6977 PREDICTED: Mytilus californianus serine/threonine-protein kinase N2-like (LOC127729428), transcript variant X1, mRNA blastn 24854 348 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
9120289 9120289 PRJNA1078753_P_NODE_4168_length_505_cov_1.243056_g3972_i0 PRJNA1078753 4168 505 1.243056 6.2774328 Physella acuta 109671 Mollusca Mollusca 58.4 0.001   NTclustered gi|2572447712|ref|XM_059289575.1| 109671 g3972 i0 100 0.0613861386138614 31 0 6 0 106 136 2852 2822 PREDICTED: Physella acuta PHD and RING finger domain-containing protein 1-like (LOC131932638), transcript variant X1, mRNA blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
10395872 10395872 PRJNA1078753_P_NODE_29249_length_250_cov_0.870056_g29053_i0 PRJNA1078753 29249 250 0.870056 2.17514 Pecten maximus 6579 Mollusca Mollusca 54.7 0.006   NTclustered gi|1835489159|ref|XM_033882634.1| 6579 g29053 i0 100 0.116 29 0 12 0 60 88 1382 1410 PREDICTED: Pecten maximus ubiquitin-conjugating enzyme E2 U-like (LOC117326045), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
11671137 11671137 PRJNA1078753_P_NODE_1530_length_774_cov_1.937233_g1360_i0 PRJNA1078753 1530 774 1.937233 14.99418342 Saccostrea cuccullata 36930 Mollusca Mollusca 86.1 7.65e-12   NTclustered gi|2669106401|ref|XM_062732311.1| 36930 g1360 i0 74.348 0.297157622739018 230 45 29 13 272 494 324 546 PREDICTED: Saccostrea cucullata large ribosomal subunit protein uL1-like (LOC134249968), mRNA blastn 230 86.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
11671271 11671271 PRJNA1078753_P_NODE_31930_length_248_cov_0.880000_g31734_i0 PRJNA1078753 31930 248 0.88 2.1824 Gigantopelta aegis 1735272 Mollusca Mollusca 52.8 0.022   NTclustered gi|2034308894|ref|XM_041495899.1| 1735272 g31734 i0 100 0.112903225806452 28 0 11 0 211 238 1611 1638 PREDICTED: Gigantopelta aegis lebercilin-like (LOC121370582), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
12946227 12946227 PRJNA1078753_P_NODE_16771_length_293_cov_1.668182_g16575_i0 PRJNA1078753 16771 293 1.668182 4.88777326 Bradybaena similaris 145626 Mollusca Mollusca 60.2 1.62e-4   NTclustered gi|2912991694|dbj|AP039596.1| 145626 g16575 i0 100 0.109215017064846 32 0 11 0 104 135 24655243 24655212 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence blastn 32 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
12946367 12946367 PRJNA1078753_P_NODE_34751_length_246_cov_1.260116_g34555_i0 PRJNA1078753 34751 246 1.260116 3.09988536 Ruditapes philippinarum 129788 Mollusca Mollusca 89.8 1.69e-13   NTclustered gi|2616577513|ref|XM_060719752.1| 129788 g34555 i0 77.439 1.33333333333333 164 27 66 8 42 203 2034 1879 PREDICTED: Ruditapes philippinarum DNA ligase 1-like (LOC132733137), transcript variant X2, mRNA blastn 328 89.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
14221249 14221249 PRJNA1078753_P_NODE_24012_length_262_cov_2.052910_g23816_i0 PRJNA1078753 24012 262 2.05291 5.3786242 Bradybaena similaris 145626 Mollusca Mollusca 60.2 1.43e-4   NTclustered gi|2912999747|dbj|AP039606.1| 145626 g23816 i0 100 0.244274809160305 32 0 12 0 17 48 46657624 46657593 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 25, sequence blastn 64 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
16769593 16769593 PRJNA1078753_P_NODE_34734_length_246_cov_1.335260_g34538_i0 PRJNA1078753 34734 246 1.33526 3.2847396 Bradybaena similaris 145626 Mollusca Mollusca 65.8 2.85e-6   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g34538 i0 95.122 0.166666666666667 41 2 17 0 206 246 56991944 56991984 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 41 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
16769600 16769600 PRJNA1078753_P_NODE_36334_length_245_cov_0.895349_g36138_i0 PRJNA1078753 36334 245 0.895349 2.19360505 Mytilus californianus 6549 Mollusca Mollusca 134 7.68e-27   NTclustered gi|2334717634|ref|XM_052246798.1| 6549 g36138 i0 84.444 1.1265306122449 135 21 55 0 24 158 315 181 PREDICTED: Mytilus californianus U6 snRNA-associated Sm-like protein LSm6 (LOC127736203), mRNA blastn 276 134 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
16769700 16769700 PRJNA1078753_P_NODE_7914_length_388_cov_0.904762_g7718_i0 PRJNA1078753 7914 388 0.904762 3.51047656 Haliotis cracherodii 6455 Mollusca Mollusca 58.4 7.97e-4   NTclustered gi|2911858315|ref|XM_071255113.1| 6455 g7718 i0 94.595 0.095360824742268 37 2 10 0 341 377 255 219 PREDICTED: Haliotis cracherodii uncharacterized protein (LOC139472646), mRNA blastn 37 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis cracherodii
17594645 17594645 PRJNA1078753_P_NODE_18634_length_284_cov_1.459716_g18438_i0 PRJNA1078753 18634 284 1.459716 4.14559344 Metazoa 33208 Mollusca Mollusca 60.2 1.57e-4   NTclustered gi|2441997482|ref|XM_053521542.1| 6596 g18438 i0 97.143 2.53169014084507 35 1 12 0 129 163 2598 2632 PREDICTED: Mercenaria mercenaria nucleolar protein 8-like (LOC123528861), transcript variant X3, mRNA blastn 719 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
18044194 18044194 PRJNA1078753_P_NODE_10535_length_349_cov_1.115942_g10339_i0 PRJNA1078753 10535 349 1.115942 3.89463758 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.009   NTclustered gi|2912981848|dbj|AP039587.1| 145626 g10339 i0 96.875 0.0916905444126074 32 1 9 0 184 215 41078372 41078341 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 6, sequence blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
18044326 18044326 PRJNA1078753_P_NODE_28875_length_250_cov_0.870056_g28679_i0 PRJNA1078753 28875 250 0.870056 2.17514 Meghimatium bilineatum 318265 Mollusca Mollusca 457 4.1099999999999985e-124   NTclustered gi|2327913037|gb|OP311642.1| 318265 g28679 i0 99.602 3.032 251 0 100 1 1 250 5197 5447 Meghimatium bilineatum mitochondrion, complete genome blastn 758 457 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Philomycidae Meghimatium Meghimatium bilineatum
20593499 20593499 PRJNA1078753_P_NODE_12517_length_328_cov_1.207843_g12321_i0 PRJNA1078753 12517 328 1.207843 3.96172504 Biomphalaria glabrata 6526 Mollusca Mollusca 56.5 0.002   NTclustered gi|2502116075|ref|XM_013212479.2| 6526 g12321 i0 86.275 0.155487804878049 51 7 16 0 79 129 387 337 PREDICTED: Biomphalaria glabrata 60S acidic ribosomal protein P2-like (LOC106055966), mRNA blastn 51 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
20593723 20593723 PRJNA1078753_P_NODE_43557_length_241_cov_0.916667_g43361_i0 PRJNA1078753 43557 241 0.916667 2.20916747 Mya arenaria 6604 Mollusca Mollusca 52.8 0.022   NTclustered gi|2427384959|ref|XM_052915840.1| 6604 g43361 i0 100 0.232365145228216 28 0 12 0 145 172 3197 3224 PREDICTED: Mya arenaria proprotein convertase subtilisin/kexin type 5-like (LOC128211259), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
21869255 21869255 PRJNA1078753_P_NODE_15598_length_302_cov_1.008734_g15402_i0 PRJNA1078753 15598 302 1.008734 3.04637668 Dreissena polymorpha 45954 Mollusca Mollusca 62.1 4.67e-5   NTclustered gi|2364387785|ref|XM_052405594.1| 45954 g15402 i0 94.872 9.91059602649007 39 2 13 0 160 198 1425 1387 PREDICTED: Dreissena polymorpha AP2-associated protein kinase 1-like (LOC127865675), transcript variant X1, mRNA blastn 2993 62.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
21869537 21869537 PRJNA1078753_P_NODE_9478_length_362_cov_2.297578_g9282_i0 PRJNA1078753 9478 362 2.297578 8.31723236 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.003   NTclustered gi|2912991694|dbj|AP039596.1| 145626 g9282 i0 100 1.9171270718232 30 0 8 0 332 361 9258809 9258780 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence blastn 694 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
23144700 23144700 PRJNA1078753_P_NODE_17399_length_289_cov_2.851852_g17203_i0 PRJNA1078753 17399 289 2.851852 8.24185228 Mytilus californianus 6549 Mollusca Mollusca 139 1.9999999999999997e-28   NTclustered gi|2334761650|ref|XM_052209352.1| 6549 g17203 i0 86.508 30 126 17 44 0 100 225 204 79 PREDICTED: Mytilus californianus 60S ribosomal protein L27a-like (LOC127705074), mRNA blastn 8670 139 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
23144702 23144702 PRJNA1078753_P_NODE_17899_length_287_cov_1.471963_g17703_i0 PRJNA1078753 17899 287 1.471963 4.22453381 Physella acuta 109671 Mollusca Mollusca 52.8 0.027   NTclustered gi|2572382344|ref|XM_059312278.1| 109671 g17703 i0 100 0.0975609756097561 28 0 10 0 116 143 2728 2755 PREDICTED: Physella acuta nucleolar protein dao-5-like (LOC131950214), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
23144796 23144796 PRJNA1078753_P_NODE_3239_length_560_cov_2.369610_g3046_i0 PRJNA1078753 3239 560 2.36961 13.269816 Lottia gigantea 225164 Mollusca Mollusca 322 3.81e-83   NTclustered gi|676441926|ref|XM_009051394.1| 225164 g3046 i0 80 37.0035714285714 440 84 78 4 123 560 637 200 Lottia gigantea hypothetical protein mRNA blastn 20722 322 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
23144838 23144838 PRJNA1078753_P_NODE_3719_length_529_cov_20.026316_g3525_i0 PRJNA1078753 3719 529 20.026316 105.93921164 Lottia gigantea 225164 Mollusca Mollusca 409 2.67e-109   NTclustered gi|676464446|ref|XM_009058677.1| 225164 g3525 i0 80.916 170.850661625709 524 94 98 6 1 521 409 929 Lottia gigantea hypothetical protein partial mRNA blastn 90380 409 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
24418338 24418338 PRJNA1078753_P_NODE_12920_length_324_cov_1.673307_g12724_i0 PRJNA1078753 12920 324 1.673307 5.42151468 Argopecten irradians 31199 Mollusca Mollusca 56.5 0.002   NTclustered gi|2835322725|ref|XM_069253305.1| 31199 g12724 i0 97.059 0.524691358024691 34 0 10 1 34 67 509 477 PREDICTED: Argopecten irradians uncharacterized protein (LOC138312427), partial mRNA blastn 170 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;