RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1078753" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1078753 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
192706 192706 PRJNA1078753_P_NODE_7061_length_406_cov_1.177177_g6865_i0 PRJNA1078753 7061 406 1.177177 4.77933862 Hirudo verbana 311461 Annelida Annelida 52.8 0.039   NTclustered gi|2918369720|emb|OZ237792.1| 311461 g6865 i0 100 0.0689655172413793 28 0 7 0 40 67 541123 541096 Hirudo verbana genome assembly, chromosome: 14 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
4019180 4019180 PRJNA1078753_P_NODE_37604_length_244_cov_1.801170_g37408_i0 PRJNA1078753 37604 244 1.80117 4.3948548 Ailoscolex lacteospumosus 1046305 Annelida Annelida 52.8 0.022   NTclustered gi|2920003644|emb|OZ238875.1| 1046305 g37408 i0 100 0.114754098360656 28 0 11 0 208 235 1044328 1044301 Ailoscolex lacteospumosus genome assembly, chromosome: 16 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
9120229 9120229 PRJNA1078753_P_NODE_34868_length_246_cov_0.890173_g34672_i0 PRJNA1078753 34868 246 0.890173 2.18982558 Ailoscolex lacteospumosus 1046305 Annelida Annelida 52.8 0.022   NTclustered gi|2920003644|emb|OZ238875.1| 1046305 g34672 i0 100 0.113821138211382 28 0 11 0 166 193 15283824 15283797 Ailoscolex lacteospumosus genome assembly, chromosome: 16 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
11671381 11671381 PRJNA1078753_P_NODE_4710_length_481_cov_1.517157_g4514_i0 PRJNA1078753 4710 481 1.517157 7.29752517 Ailoscolex lacteospumosus 1046305 Annelida Annelida 56.5 0.004   NTclustered gi|2920003371|emb|OZ238862.1| 1046305 g4514 i0 96.97 0.137214137214137 33 1 7 0 150 182 17724979 17725011 Ailoscolex lacteospumosus genome assembly, chromosome: 3 blastn 66 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
12495640 12495640 PRJNA1078753_P_NODE_13930_length_315_cov_1.272727_g13734_i0 PRJNA1078753 13930 315 1.272727 4.00909005 Metazoa 33208 Annelida Annelida 172 2.17e-38   NTclustered gi|61652092|gb|AY838863.1| 318792 g13734 i0 92.5 37.5936507936508 120 9 38 0 191 310 2105 1986 Oenone fulgida 28S ribosomal RNA gene, partial sequence blastn 11842 172 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Eunicida Oenonidae Oenone Oenone fulgida
21869340 21869340 PRJNA1078753_P_NODE_26938_length_251_cov_1.297753_g26742_i0 PRJNA1078753 26938 251 1.297753 3.25736003 Helobdella robusta 6412 Annelida Annelida 52.8 0.023   NTclustered gi|675861375|ref|XM_009018000.1| 6412 g26742 i0 100 0.111553784860558 28 0 11 0 149 176 738 765 Helobdella robusta hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
21869422 21869422 PRJNA1078753_P_NODE_36698_length_245_cov_0.895349_g36502_i0 PRJNA1078753 36698 245 0.895349 2.19360505 Hirudo verbana 311461 Annelida Annelida 52.8 0.022   NTclustered gi|2918369706|emb|OZ237788.1| 311461 g36502 i0 94.118 0.138775510204082 34 2 14 0 119 152 9399612 9399579 Hirudo verbana genome assembly, chromosome: 10 blastn 34 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;