RNAquarium Metadata Server
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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA1078753" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 13 ✖

bioproject 1

  • PRJNA1078753 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2292304 2292304 PRJNA1078753_P_NODE_41662_length_242_cov_0.911243_g41466_i0 PRJNA1078753 41662 242 0.911243 2.20520806 Paramyxoviridae 11158 Viruses Viruses 448 2.3799999999999995e-121   NTclustered gi|2721617856|gb|PP711545.1| 251774 g41466 i0 100 68.2148760330578 242 0 100 0 1 242 13003 12762 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 16508 448 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
2743426 2743426 PRJNA1078753_P_NODE_7483_length_396_cov_3.563467_g7287_i0 PRJNA1078753 7483 396 3.563467 14.11132932 Crinivirus ipomeae 3428114 Viruses Viruses 52.8 0.038   NTclustered gi|1563209845|gb|MH614270.1| 81931 g7287 i0 100 0.0707070707070707 28 0 7 0 333 360 5718 5691 Sweet potato chlorotic stunt virus isolate SPCSV-UNB-01 segment RNA2, complete sequence blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Crinivirus Crinivirus ipomeae
3567679 3567679 PRJNA1078753_P_NODE_9103_length_368_cov_1.044068_g8907_i0 PRJNA1078753 9103 368 1.044068 3.84217024 Paramyxoviridae 11158 Viruses Viruses 675 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g8907 i0 99.728 85.2798913043478 368 1 100 0 1 368 1656 1289 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 31383 680 0.992647058823529 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
9945008 9945008 PRJNA1078753_P_NODE_1668_length_746_cov_1.306092_g1494_i0 PRJNA1078753 1668 746 1.306092 9.74344632 Orthorubulavirus 2560195 Viruses Viruses 1367 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g1494 i0 99.732 73.3632707774799 746 2 100 0 1 746 4609 3864 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 54729 1373 0.995630007283321 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
12495740 12495740 PRJNA1078753_P_NODE_31370_length_248_cov_2.640000_g31174_i0 PRJNA1078753 31370 248 2.64 6.5472 Paramyxoviridae 11158 Viruses Viruses 459 1.13e-124   NTclustered gi|2721617856|gb|PP711545.1| 251774 g31174 i0 100 96.9838709677419 248 0 100 0 1 248 4540 4787 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 24052 459 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
14221150 14221150 PRJNA1078753_P_NODE_11592_length_337_cov_1.295455_g11396_i0 PRJNA1078753 11592 337 1.295455 4.36568335 Sopapen virus 3131614 Viruses Viruses 139 2.37e-28   NTclustered gi|2717322942|gb|PP173915.1| 3131614 g11396 i0 93.548 7.86943620178042 93 6 28 0 82 174 435 527 MAG: Sopapen virus isolate SP1A_k141_131186 genomic sequence blastn 2652 139 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sopapen virus
15044525 15044525 PRJNA1078753_P_NODE_19332_length_281_cov_1.475962_g19136_i0 PRJNA1078753 19332 281 1.475962 4.14745322 Paramyxoviridae 11158 Viruses Viruses 520 5.909999999999999e-143   NTclustered gi|2721617856|gb|PP711545.1| 251774 g19136 i0 100 68.9964412811388 281 0 100 0 1 281 2514 2234 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 19388 520 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
16319307 16319307 PRJNA1078753_P_NODE_12693_length_326_cov_1.818182_g12497_i0 PRJNA1078753 12693 326 1.818182 5.92727332 Paramyxoviridae 11158 Viruses Viruses 597 3.139999999999999e-166   NTclustered gi|2721617856|gb|PP711545.1| 251774 g12497 i0 99.693 83.9815950920245 326 1 100 0 1 326 6500 6175 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 27378 603 0.990049751243781 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
17594714 17594714 PRJNA1078753_P_NODE_30214_length_249_cov_0.875000_g30018_i0 PRJNA1078753 30214 249 0.875 2.17875 Paramyxoviridae 11158 Viruses Viruses 460 3.16e-125   NTclustered gi|2721617856|gb|PP711545.1| 251774 g30018 i0 100 67.6987951807229 249 0 100 0 1 249 2538 2786 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 16857 460 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
19318469 19318469 PRJNA1078753_P_NODE_9736_length_359_cov_1.356643_g9540_i0 PRJNA1078753 9736 359 1.356643 4.87034837 Fabavirus betaviciae 3047702 Viruses Viruses 259 1.87e-64   NTclustered gi|2202597465|gb|MZ571837.1| 76875 g9540 i0 80.347 4.14763231197772 346 65 96 3 1 344 2864 3208 Broad bean wilt virus 2 isolate LNSY-YZC segment RNA2, complete sequence blastn 1489 259 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Fabavirus Fabavirus betaviciae
20143315 20143315 PRJNA1078753_P_NODE_30836_length_249_cov_0.875000_g30640_i0 PRJNA1078753 30836 249 0.875 2.17875 Orthorubulavirus 2560195 Viruses Viruses 460 3.16e-125   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g30640 i0 100 68.7228915662651 249 0 100 0 1 249 6482 6234 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 17112 460 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
21418885 21418885 PRJNA1078753_P_NODE_1737_length_735_cov_1.122356_g1561_i0 PRJNA1078753 1737 735 1.122356 8.2493166 Orthorubulavirus 2560195 Viruses Viruses 1347 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g1561 i0 99.728 97.9931972789116 735 2 100 0 1 735 5350 4616 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 72025 1347 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
24418554 24418554 PRJNA1078753_P_NODE_40060_length_243_cov_0.905882_g39864_i0 PRJNA1078753 40060 243 0.905882 2.20129326 Sopafab virus 3131770 Viruses Viruses 300 7.08e-77   NTclustered gi|2717323354|gb|PP174071.1| 3131770 g39864 i0 89.583 243.802469135802 240 20 98 5 2 238 3124 3361 MAG: Sopafab virus isolate SP1C_k141_220867 genomic sequence blastn 59244 300 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sopafab virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;