contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA1078753" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1467071 | 1467071 | PRJNA1078753_P_NODE_17622_length_288_cov_2.548837_g17426_i0 | PRJNA1078753 | 17622 | 288 | 2.548837 | 7.34065056 | Tuwongella immobilis | 692036 | Bacteria | Bacteria | 387 | 6.43e-103 | NTclustered | gi|1804913728|emb|LR593887.1| | 692036 | g17426 | i0 | 90.941 | 142.006944444444 | 287 | 26 | 99 | 0 | 2 | 288 | 2738014 | 2737728 | Tuwongella immobilis isolate MBLW1 genome assembly, chromosome: 1 | blastn | 40898 | 387 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Tuwongella | Tuwongella immobilis | |
| 3567657 | 3567657 | PRJNA1078753_P_NODE_6143_length_430_cov_2.140056_g5947_i0 | PRJNA1078753 | 6143 | 430 | 2.140056 | 9.2022408 | Limnoglobus | 2731450 | Bacteria | Bacteria | 291 | 8.08e-74 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g5947 | i0 | 79.505 | 16.7953488372093 | 444 | 63 | 100 | 24 | 1 | 430 | 2002113 | 2001684 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 7222 | 291 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 4019165 | 4019165 | PRJNA1078753_P_NODE_3584_length_537_cov_2.607759_g3390_i0 | PRJNA1078753 | 3584 | 537 | 2.607759 | 14.00366583 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 745 | 0 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g3390 | i0 | 91.963 | 136.942271880819 | 535 | 37 | 99 | 5 | 7 | 537 | 7051359 | 7050827 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 73538 | 745 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 5295305 | 5295305 | PRJNA1078753_P_NODE_21025_length_274_cov_1.457711_g20829_i0 | PRJNA1078753 | 21025 | 274 | 1.457711 | 3.99412814 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 374 | 4.7299999999999984e-99 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g20829 | i0 | 91.273 | 225.828467153285 | 275 | 22 | 100 | 2 | 1 | 274 | 7051083 | 7050810 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 61877 | 374 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 5295338 | 5295338 | PRJNA1078753_P_NODE_25825_length_255_cov_1.390110_g25629_i0 | PRJNA1078753 | 25825 | 255 | 1.39011 | 3.5447805 | Limnoglobus roseus | 2598579 | Bacteria | Bacteria | 159 | 1.33e-34 | NTclustered | gi|1733446852|gb|CP042425.1| | 2598579 | g25629 | i0 | 78.682 | 1.33333333333333 | 258 | 42 | 99 | 12 | 2 | 253 | 2337305 | 2337055 | Limnoglobus roseus strain PX52 chromosome, complete genome | blastn | 340 | 159 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Limnoglobus | Limnoglobus roseus | |
| 6570555 | 6570555 | PRJNA1078753_P_NODE_38406_length_244_cov_0.900585_g38210_i0 | PRJNA1078753 | 38406 | 244 | 0.900585 | 2.1974274 | Isosphaeraceae bacterium EP7 | 3139350 | Bacteria | Bacteria | 267 | 7.219999999999999e-67 | NTclustered | gi|2719878338|gb|CP151667.1| | 3139350 | g38210 | i0 | 89.573 | 19.0614754098361 | 211 | 20 | 86 | 2 | 1 | 210 | 6431224 | 6431433 | Isosphaeraceae bacterium EP7 chromosome, complete genome | blastn | 4651 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium EP7 | ||
| 9120312 | 9120312 | PRJNA1078753_P_NODE_44028_length_235_cov_4.617284_g43832_i0 | PRJNA1078753 | 44028 | 235 | 4.617284 | 10.8506174 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 333 | 6.719999999999999e-87 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g43832 | i0 | 92.373 | 205.782978723404 | 236 | 15 | 100 | 3 | 1 | 235 | 7053205 | 7053438 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 48359 | 333 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 11671203 | 11671203 | PRJNA1078753_P_NODE_2370_length_645_cov_3.246503_g2181_i0 | PRJNA1078753 | 2370 | 645 | 3.246503 | 20.93994435 | Tuwongella immobilis | 692036 | Bacteria | Bacteria | 769 | 0 | NTclustered | gi|1804913728|emb|LR593887.1| | 692036 | g2181 | i0 | 88.415 | 88.2961240310077 | 656 | 52 | 100 | 21 | 1 | 645 | 2736328 | 2736970 | Tuwongella immobilis isolate MBLW1 genome assembly, chromosome: 1 | blastn | 56951 | 769 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Tuwongella | Tuwongella immobilis | |
| 12946208 | 12946208 | PRJNA1078753_P_NODE_13331_length_320_cov_2.408907_g13135_i0 | PRJNA1078753 | 13331 | 320 | 2.408907 | 7.7085024 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 440 | 5.479999999999999e-119 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g13135 | i0 | 91.385 | 175.0875 | 325 | 23 | 100 | 3 | 1 | 320 | 2004393 | 2004069 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 56028 | 440 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 16769393 | 16769393 | PRJNA1078753_P_NODE_10914_length_345_cov_1.110294_g10718_i0 | PRJNA1078753 | 10914 | 345 | 1.110294 | 3.8305143 | Anaerohalosphaeraceae bacterium | 2873829 | Bacteria | Bacteria | 63.9 | 1.51e-5 | NTclustered | gi|2621717560|emb|OY775912.1| | 2873829 | g10718 | i0 | 88.462 | 0.695652173913043 | 52 | 6 | 15 | 0 | 132 | 183 | 1661263 | 1661212 | MAG: Anaerohalosphaeraceae bacterium isolate 978f9c3d-91dc-4e11-95ec-8fa255ba7f00 genome assembly, chromosome: 1 | blastn | 240 | 63.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Anaerohalosphaeraceae | Anaerohalosphaeraceae bacterium | ||
| 20143313 | 20143313 | PRJNA1078753_P_NODE_2996_length_580_cov_4.992110_g2804_i0 | PRJNA1078753 | 2996 | 580 | 4.99211 | 28.954238 | Gemmata | 113 | Bacteria | Bacteria | 652 | 0 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g2804 | i0 | 87.329 | 157.363793103448 | 584 | 57 | 100 | 14 | 1 | 580 | 2941787 | 2942357 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 91271 | 654 | 0.996941896024465 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 21869387 | 21869387 | PRJNA1078753_P_NODE_3278_length_557_cov_4.634298_g3085_i0 | PRJNA1078753 | 3278 | 557 | 4.634298 | 25.81303986 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 627 | 7.169999999999999e-175 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g3085 | i0 | 86.972 | 221.526032315978 | 568 | 61 | 100 | 11 | 1 | 557 | 7050256 | 7050821 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 123390 | 627 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 24418388 | 24418388 | PRJNA1078753_P_NODE_19740_length_279_cov_2.004854_g19544_i0 | PRJNA1078753 | 19740 | 279 | 2.004854 | 5.59354266 | uncultured Planctomycetia bacterium | 411917 | Bacteria | Bacteria | 499 | 7.63e-137 | NTclustered | gi|162137840|gb|EU298668.1| | 411917 | g19544 | i0 | 98.925 | 100.010752688172 | 279 | 3 | 100 | 0 | 1 | 279 | 565 | 287 | Uncultured Planctomycetacia bacterium clone GASP-KB3S2_G09 16S ribosomal RNA gene, partial sequence | blastn | 27903 | 499 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | uncultured Planctomycetia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;