RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1074408" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1074408 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9118616 9118616 PRJNA1074408_S_NODE_348_length_677_cov_31.075710_g252_i0 PRJNA1074408 348 677 31.07571 210.3825567 Enterocytozoon sp. ex Acetes sibogae australis 2881109 Fungi Fungi 861 0   NTclustered gi|2108103202|gb|OK413268.1| 2881109 g252 i0 89.808 86.9453471196455 677 62 99 6 3 677 1020 349 Enterocytozoon sp. ex Acetes sibogae australis isolate RA19015_21 small subunit ribosomal RNA gene, partial sequence blastn 58862 861 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterocytozoon Enterocytozoon sp. ex Acetes sibogae australis
16767933 16767933 PRJNA1074408_S_NODE_34_length_1663_cov_17.196914_g12_i0 PRJNA1074408 34 1663 17.196914 285.98467982 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 741 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g12 i0 85.226 13.3066746843055 731 96 92 12 913 1636 2468 1743 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22129 741 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
18042714 18042714 PRJNA1074408_S_NODE_10015_length_150_cov_4.532710_g9885_i0 PRJNA1074408 10015 150 4.53271 6.799065 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 265 1.44e-66   NTclustered gi|2522768008|gb|OR162445.1| 646526 g9885 i0 98.667 13.2333333333333 150 1 100 1 1 150 3814 3666 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1985 265 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
23143228 23143228 PRJNA1074408_S_NODE_1039_length_436_cov_11.155216_g909_i0 PRJNA1074408 1039 436 11.155216 48.63674176 Ecytonucleospora nucleophila 1295219 Fungi Fungi 562 1.5699999999999997e-155   NTclustered gi|529283990|gb|KF135643.1| 1295219 g909 i0 91.443 85.8256880733945 409 35 94 0 1 409 412 4 Enterospora nucleophila isolate ENTA2 small subunit ribosomal RNA gene, partial sequence blastn 37420 562 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora nucleophila
24416907 24416907 PRJNA1074408_S_NODE_2920_length_268_cov_10.551111_g2790_i0 PRJNA1074408 2920 268 10.551111 28.27697748 Vittaforma corneae 42399 Fungi Fungi 121 6.63e-23   NTclustered gi|667639983|ref|XR_552275.1| 993615 g2790 i0 81.132 17.9701492537313 159 22 58 6 1 156 2208 2361 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 4816 121 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;