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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1074408" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1074408 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1465578 1465578 PRJNA1074408_S_NODE_2722_length_278_cov_6.110638_g2592_i0 PRJNA1074408 2722 278 6.110638 16.98757364 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 464 2.77e-126   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g2592 i0 96.774 50.5431654676259 279 7 100 2 1 278 2764 3041 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14051 464 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
5293820 5293820 PRJNA1074408_S_NODE_1045_length_435_cov_2.982143_g915_i0 PRJNA1074408 1045 435 2.982143 12.97232205 Allovahlkampfia sp. SG-2014c 1445708 Heterolobosea other_Eukaryota 749 0   NTclustered gi|574484036|gb|KF547915.1| 1445708 g915 i0 97.701 91.5402298850575 435 10 100 0 1 435 853 1287 Allovahlkampfia sp. SG-2014c 18S ribosomal RNA gene, partial sequence blastn 39820 749 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. SG-2014c
5293852 5293852 PRJNA1074408_S_NODE_945_length_453_cov_3.297561_g815_i0 PRJNA1074408 945 453 3.297561 14.93795133 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 809 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g815 i0 98.896 87.682119205298 453 5 100 0 1 453 3512 3060 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 39720 809 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
6568917 6568917 PRJNA1074408_S_NODE_4746_length_212_cov_5.745562_g4616_i0 PRJNA1074408 4746 212 5.745562 12.18059144 Allovahlkampfia sp. SG-2014c 1445708 Heterolobosea other_Eukaryota 381 2.0899999999999994e-101   NTclustered gi|574484036|gb|KF547915.1| 1445708 g4616 i0 99.057 25.2122641509434 212 2 100 0 1 212 452 241 Allovahlkampfia sp. SG-2014c 18S ribosomal RNA gene, partial sequence blastn 5345 381 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. SG-2014c
9944686 9944686 PRJNA1074408_S_NODE_4148_length_227_cov_3.885870_g4018_i0 PRJNA1074408 4148 227 3.88587 8.8209249 Naegleria 5761 Heterolobosea other_Eukaryota 167 6.9199999999999995e-37   NTclustered gi|2031946985|emb|OD958550.1| 5763 g4018 i0 80.617 30.3612334801762 227 34 100 5 1 227 3228 3012 Naegleria fowleri Karachi_NF001 strain blastn 6892 167 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
10394274 10394274 PRJNA1074408_S_NODE_289_length_727_cov_5.086257_g198_i0 PRJNA1074408 289 727 5.086257 36.97708839 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 1129 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g198 i0 94.78 18.5103163686382 728 33 100 5 1 727 4553 3830 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13457 1129 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
14219701 14219701 PRJNA1074408_S_NODE_1812_length_337_cov_4.397959_g1682_i0 PRJNA1074408 1812 337 4.397959 14.82112183 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 457 5.7699999999999985e-124   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g1682 i0 91.15 19.9287833827893 339 27 100 3 1 337 2422 2085 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6716 457 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
16767924 16767924 PRJNA1074408_S_NODE_1434_length_378_cov_2.579104_g1304_i0 PRJNA1074408 1434 378 2.579104 9.74901312 Allovahlkampfia sp. strain SO/1P 500012 Heterolobosea other_Eukaryota 669 0   NTclustered gi|529154115|gb|EU266548.2| 500012 g1304 i0 98.681 69.6984126984127 379 1 100 4 1 378 543 918 Allovahlkampfia sp. strain SO/1P small subunit ribosomal RNA gene, complete sequence blastn 26346 669 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. strain SO/1P

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;