RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1074408" and tax_kingdom = "Heunggongvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Heunggongvirae · 2 ✖

bioproject 1

  • PRJNA1074408 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11669667 11669667 PRJNA1074408_S_NODE_5530_length_197_cov_1.870130_g5400_i0 PRJNA1074408 5530 197 1.87013 3.6841561 Caudoviricetes sp. 2832643 Viruses Viruses 359 8.98e-95   NTclustered gi|2057146744|tpg|BK058424.1| 2832643 g5400 i0 99.492 4.57868020304569 197 1 100 0 1 197 1390 1586 MAG TPA_asm: Caudoviricetes sp. isolate ctU2V15, partial genome blastn 902 359 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
18868102 18868102 PRJNA1074408_S_NODE_2395_length_295_cov_1009.746032_g2265_i0 PRJNA1074408 2395 295 1009.746032 2978.7507944 root 1 Root_unresolved Root_unresolved 122 2.06e-23   NTclustered gi|1893169343|gb|MT364888.1| 10310 g2265 i0 94.937 24.335593220339 79 2 27 2 11 89 4 80 Human alphaherpesvirus 2, partial genome blastn 7179 122 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;