RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1074407" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1074407 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5291945 5291945 PRJNA1074407_P_NODE_22905_length_1259_cov_6.575885_g20304_i0 PRJNA1074407 22905 1259 6.575885 82.79039215 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 1563 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g20304 i0 89.142 91.8316123907863 1271 117 100 16 1 1259 30 1291 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 115616 1563 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
15493346 15493346 PRJNA1074407_P_NODE_85853_length_405_cov_1.710843_g82017_i0 PRJNA1074407 85853 405 1.710843 6.92891415 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 551 3.139999999999999e-152   NTclustered gi|2522768008|gb|OR162445.1| 646526 g82017 i0 95.918 46.0444444444444 343 9 84 3 1 339 3661 4002 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18648 551 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
16765898 16765898 PRJNA1074407_P_NODE_148394_length_213_cov_4.792857_g144556_i0 PRJNA1074407 148394 213 4.792857 10.20878541 Vittaforma corneae 42399 Fungi Fungi 126 1.09e-24   NTclustered gi|667639983|ref|XR_552275.1| 993615 g144556 i0 81.481 24.018779342723 162 22 75 6 1 159 2205 2361 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 5116 126 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;