RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1073712" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 2 ✖

bioproject 1

  • PRJNA1073712 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10390861 10390861 PRJNA1073712_P_NODE_14749_length_245_cov_0.895349_g14666_i0 PRJNA1073712 14749 245 0.895349 2.19360505 Inoviridae sp. 2219103 Viruses Viruses 425 1.1299999999999999e-114   NTclustered gi|2056811783|tpg|BK057524.1| 2219103 g14666 i0 97.959 1 245 5 100 0 1 245 7675 7919 MAG TPA_asm: Inoviridae sp. isolate ctvvg3, partial genome blastn 245 425 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
20588586 20588586 PRJNA1073712_P_NODE_13557_length_247_cov_0.885057_g13474_i0 PRJNA1073712 13557 247 0.885057 2.18609079 Inoviridae sp. ctiYN10 2828085 Viruses Viruses 451 1.88e-122   NTclustered gi|2054402287|tpg|BK031239.1| 2828085 g13474 i0 99.595 31.2631578947368 247 1 100 0 1 247 10356 10110 MAG TPA_asm: Inoviridae sp. ctiYN10, partial genome blastn 7722 451 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp. ctiYN10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;