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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA1073712" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 22 ✖

bioproject 1

  • PRJNA1073712 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1462185 1462185 PRJNA1073712_P_NODE_8222_length_280_cov_1.304348_g8139_i0 PRJNA1073712 8222 280 1.304348 3.6521744 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 305 1.79e-78   NTclustered gi|829196136|ref|XM_001025866.3| 312017 g8139 i0 87.547 0.946428571428571 265 31 94 2 17 280 510 247 Tetrahymena thermophila SB210 translationally-controlled tumor-like protein partial mRNA blastn 265 305 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
2291519 2291519 PRJNA1073712_P_NODE_14742_length_245_cov_0.895349_g14659_i0 PRJNA1073712 14742 245 0.895349 2.19360505 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 403 5.299999999999998e-108   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g14659 i0 96.327 68.9795918367347 245 9 100 0 1 245 214 458 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 16900 403 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
2738179 2738179 PRJNA1073712_P_NODE_16463_length_242_cov_0.911243_g16380_i0 PRJNA1073712 16463 242 0.911243 2.20520806 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 193 1.23e-44   NTclustered gi|829185314|ref|XM_001031847.2| 312017 g16380 i0 92.537 0.553719008264463 134 10 55 0 109 242 720 587 Tetrahymena thermophila SB210 60S ribosomal protein L7 partial mRNA blastn 134 193 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
2738229 2738229 PRJNA1073712_P_NODE_8663_length_275_cov_1.386139_g8580_i0 PRJNA1073712 8663 275 1.386139 3.81188225 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 195 3.97e-45   NTclustered gi|657012367|gb|KF302531.1| 2850 g8580 i0 83.568 24.3563636363636 213 29 76 6 4 213 225 16 Phaeodactylum tricornutum clone C443 40S ribosomal protein mRNA, partial cds blastn 6698 195 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
3566803 3566803 PRJNA1073712_P_NODE_4223_length_351_cov_1.158273_g4140_i0 PRJNA1073712 4223 351 1.158273 4.06553823 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 405 2.21e-108   NTclustered gi|3861467|emb|AJ012585.1| 5911 g4140 i0 88.788 5.51851851851852 330 37 94 0 11 340 3135 2806 Tetrahymena thermophila macronuclear gene encoding ribosomal protein L3, exons 1-2 blastn 1937 405 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
4013974 4013974 PRJNA1073712_P_NODE_11544_length_250_cov_2.033898_g11461_i0 PRJNA1073712 11544 250 2.033898 5.084745 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 462 8.83e-126   NTclustered gi|325195820|emb|FR826611.1| 890382 g11461 i0 100 21.136 250 0 100 0 1 250 278 29 Albugo laibachii Nc14, genomic contig CONTIG_3778_NC14_v4_313_8 blastn 5284 462 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
6565509 6565509 PRJNA1073712_P_NODE_11006_length_252_cov_1.290503_g10923_i0 PRJNA1073712 11006 252 1.290503 3.25206756 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 466 6.89e-127   NTclustered gi|323690576|gb|GU935635.1| 88167 g10923 i0 100 100.043650793651 252 0 100 0 1 252 1548 1799 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 25211 466 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
6565526 6565526 PRJNA1073712_P_NODE_12726_length_248_cov_0.880000_g12643_i0 PRJNA1073712 12726 248 0.88 2.1824 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 215 2.7e-51   NTclustered gi|675199240|ref|XM_008910257.1| 761204 g12643 i0 82.661 89.8145161290323 248 37 100 3 1 248 785 1026 Phytophthora parasitica INRA-310 ATP synthase subunit beta, mitochondrial mRNA blastn 22274 215 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
6565609 6565609 PRJNA1073712_P_NODE_7566_length_287_cov_1.598131_g7483_i0 PRJNA1073712 7566 287 1.598131 4.58663597 Paulinella micropora 1928728 SAR_Eukaryotes SAR_Eukaryotes 215 3.2e-51   NTclustered gi|1389527547|dbj|LC383946.1| 1928728 g7483 i0 83.772 115.383275261324 228 35 79 2 27 253 687 913 Paulinella micropora gene for polyubiquitin, complete cds blastn 33115 215 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella micropora
7840251 7840251 PRJNA1073712_P_NODE_4187_length_352_cov_1.103943_g4104_i0 PRJNA1073712 4187 352 1.103943 3.88587936 Aurantiochytrium sp. 1689870 SAR_Eukaryotes SAR_Eukaryotes 113 1.5e-20   NTclustered gi|1236772359|gb|MF766429.1| 1689870 g4104 i0 84.956 28.3181818181818 113 16 32 1 109 221 1872 1983 Aurantiochytrium sp. strain CCAP_4062/3 large subunit ribosomal RNA gene, partial sequence blastn 9968 113 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Aurantiochytrium Aurantiochytrium sp.
8669413 8669413 PRJNA1073712_P_NODE_6147_length_309_cov_1.889831_g6064_i0 PRJNA1073712 6147 309 1.889831 5.83957779 Caryotricha 500583 SAR_Eukaryotes SAR_Eukaryotes 195 4.53e-45   NTclustered gi|759083508|gb|KM222125.1| 1004043 g6064 i0 94.444 41.0453074433657 126 7 41 0 175 300 1281 1156 Caryotricha minuta voucher LWW07112802 large subunit ribosomal RNA gene, partial sequence blastn 12683 195 1 Eukaryota Sar   Ciliophora Spirotrichea Kiitrichida Kiitrichidae Caryotricha Caryotricha minuta
9944337 9944337 PRJNA1073712_P_NODE_13728_length_246_cov_1.554913_g13645_i0 PRJNA1073712 13728 246 1.554913 3.82508598 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 305 1.54e-78   NTclustered gi|315570322|tpg|BK007923.1| 5911 g13645 i0 89.024 2.99593495934959 246 27 100 0 1 246 183 428 TPA_exp: Tetrahymena thermophila 40S ribosomal protein rpS16e mRNA, complete cds blastn 737 305 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
11666264 11666264 PRJNA1073712_P_NODE_17030_length_241_cov_0.916667_g16947_i0 PRJNA1073712 17030 241 0.916667 2.20916747 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 211 3.38e-50   NTclustered gi|229594318|ref|XM_001030083.3| 312017 g16947 i0 84.404 0.904564315352697 218 31 90 3 4 219 217 1 Tetrahymena thermophila SB210 40S ribosomal protein S3 partial mRNA blastn 218 211 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
12941326 12941326 PRJNA1073712_P_NODE_13811_length_246_cov_0.890173_g13728_i0 PRJNA1073712 13811 246 0.890173 2.18982558 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 348 2.53e-91   NTclustered gi|829153590|ref|XM_001010934.3| 312017 g13728 i0 92.245 0.995934959349594 245 19 99 0 1 245 263 19 Tetrahymena thermophila SB210 transcription factor BTF3a partial mRNA blastn 245 348 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
12941369 12941369 PRJNA1073712_P_NODE_2611_length_412_cov_212.566372_g2528_i0 PRJNA1073712 2611 412 212.566372 875.77345264 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 294 5.96e-75   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g2528 i0 93.5 49.3131067961165 200 10 48 3 1 197 3656 3855 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 20317 294 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
14216333 14216333 PRJNA1073712_P_NODE_8152_length_281_cov_1.062500_g8069_i0 PRJNA1073712 8152 281 1.0625 2.985625 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|1270517201|ref|XM_720130.2| 5861 g8069 i0 100 0.099644128113879 28 0 10 0 114 141 339 312 Plasmodium yoelii conserved Plasmodium protein, unknown function (PY17X_0107800), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
15490138 15490138 PRJNA1073712_P_NODE_1053_length_577_cov_2.607143_g970_i0 PRJNA1073712 1053 577 2.607143 15.04321511 Lecythium sp. 3678_261K 238773 SAR_Eukaryotes SAR_Eukaryotes 784 0   NTclustered gi|33089893|gb|AY283756.1| 238773 g970 i0 92.086 97.7625649913345 556 44 96 0 22 577 765 210 Lecythium sp. 3678_261K actin gene, partial cds blastn 56409 784 1 Eukaryota Sar   Cercozoa Thecofilosea Tectofilosida Chlamydophryidae Lecythium Lecythium sp. 3678_261K
18039312 18039312 PRJNA1073712_P_NODE_635_length_712_cov_1.926448_g558_i0 PRJNA1073712 635 712 1.926448 13.71630976 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 1155 0   NTclustered gi|53829555|gb|AY582830.1| 289359 g558 i0 99.219 91.6685393258427 640 5 90 0 1 640 644 5 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 ef1a gene, partial cds blastn 65268 1155 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
18039323 18039323 PRJNA1073712_P_NODE_7615_length_287_cov_1.014019_g7532_i0 PRJNA1073712 7615 287 1.014019 2.91023453 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 270 6.7299999999999984e-68   NTclustered gi|829194699|ref|XM_001025224.3| 312017 g7532 i0 84.962 0.926829268292683 266 40 93 0 15 280 1 266 Tetrahymena thermophila SB210 S25 ribosomal protein partial mRNA blastn 266 270 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
18039332 18039332 PRJNA1073712_P_NODE_9355_length_268_cov_1.553846_g9272_i0 PRJNA1073712 9355 268 1.553846 4.16430728 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 228 3.8e-55   NTclustered gi|673016107|ref|XM_008863793.1| 157072 g9272 i0 82.593 8.63805970149254 270 35 96 6 1 258 340 71 Aphanomyces invadans hypothetical protein partial mRNA blastn 2315 228 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
19313276 19313276 PRJNA1073712_P_NODE_12836_length_248_cov_0.880000_g12753_i0 PRJNA1073712 12836 248 0.88 2.1824 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 259 1.23e-64   NTclustered gi|118385632|ref|XM_001025944.1| 312017 g12753 i0 85.484 1 248 36 100 0 1 248 666 419 Tetrahymena thermophila SB210 receptor of activated kinase C 1A, component of 40S small ribosomal subunit partial mRNA blastn 248 259 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
24413452 24413452 PRJNA1073712_P_NODE_11220_length_251_cov_0.865169_g11137_i0 PRJNA1073712 11220 251 0.865169 2.17157419 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 331 2.6100000000000006e-86   NTclustered gi|829164593|ref|XM_972055.3| 312017 g11137 i0 90.438 1 251 24 100 0 1 251 2131 2381 Tetrahymena thermophila SB210 cytoplasmic-like aconitate hydratase partial mRNA blastn 251 331 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;