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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1073183" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1073183 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4013890 4013890 PRJNA1073183_P_NODE_6304_length_505_cov_2.254630_g6211_i0 PRJNA1073183 6304 505 2.25463 11.3858815 Rotaria rotatoria 231624 Rotifera other_Eukaryota 520 1.13e-142   NTclustered gi|270267490|ref|NC_013568.1| 231624 g6211 i0 85.519 24.239603960396 511 58 99 16 1 504 2395 1894 Rotaria rotatoria mitochondrion, complete genome blastn 12241 520 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
7839645 7839645 PRJNA1073183_P_NODE_1187_length_1091_cov_3.614931_g1131_i0 PRJNA1073183 1187 1091 3.614931 39.43889721 Philodina sp. NPS-2005 317012 Rotifera other_Eukaryota 525 5.439999999999999e-144   NTclustered gi|62362203|gb|AY942841.1| 317012 g1131 i0 83.392 1.69477543538038 572 90 52 5 471 1039 633 64 Philodina sp. NPS-2005 guanine nucleotide binding protein beta polypeptide 2-like 1 mRNA, partial cds blastn 1849 525 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. NPS-2005
7839756 7839756 PRJNA1073183_P_NODE_18027_length_308_cov_1.821277_g17932_i0 PRJNA1073183 18027 308 1.821277 5.60953316 Philodina roseola 96448 Rotifera other_Eukaryota 374 5.4e-99   NTclustered gi|209867641|gb|EU637019.1| 96448 g17932 i0 88.599 88.9772727272727 307 35 99 0 1 307 26859 26553 Philodina roseola tyramine beta hydroxylase-like protein, metallophosphoesterase domain containing 1-like protein, transmembrane protein 45b-like protein, solute carrier family 7-like protein, G protein-coupled receptor-like protein, serpin 6 precursor, molybdenum cofactor-like protein, hypothetical protein, ankyrin repeat containing protein, neuronal calcium sensor family member 2-like protein, HSP70-like protein, hypothetical protein, Hox-5b, Smc-like protein, and golgi autoantigen golgin subfamily a4-like protein genes, complete cds blastn 27405 374 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
10390784 10390784 PRJNA1073183_P_NODE_8329_length_442_cov_1.043360_g8235_i0 PRJNA1073183 8329 442 1.04336 4.6116512 Habrotrocha constricta 104786 Rotifera other_Eukaryota 272 3.0099999999999993e-68   NTclustered gi|402761851|gb|JX184057.1| 104786 g8235 i0 79.369 1.19683257918552 412 65 91 18 1 402 873 472 Habrotrocha constricta NADH dehydrogenase subunit 4 (ND4) gene, partial cds; mitochondrial blastn 529 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
11666161 11666161 PRJNA1073183_P_NODE_8710_length_433_cov_0.855556_g8616_i0 PRJNA1073183 8710 433 0.855556 3.70455748 Habrotrocha constricta 104786 Rotifera other_Eukaryota 409 2.15e-109   NTclustered gi|402761805|gb|JX184034.1| 104786 g8616 i0 86.243 19.840646651270202 378 50 87 2 50 426 331 707 Habrotrocha constricta NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial blastn 8591 409 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
12940764 12940764 PRJNA1073183_P_NODE_11051_length_387_cov_1.245223_g10956_i0 PRJNA1073183 11051 387 1.245223 4.81901301 Philodina roseola 96448 Rotifera other_Eukaryota 359 1.94e-94   NTclustered gi|209867641|gb|EU637019.1| 96448 g10956 i0 86.503 39.4935400516796 326 44 84 0 56 381 26040 26365 Philodina roseola tyramine beta hydroxylase-like protein, metallophosphoesterase domain containing 1-like protein, transmembrane protein 45b-like protein, solute carrier family 7-like protein, G protein-coupled receptor-like protein, serpin 6 precursor, molybdenum cofactor-like protein, hypothetical protein, ankyrin repeat containing protein, neuronal calcium sensor family member 2-like protein, HSP70-like protein, hypothetical protein, Hox-5b, Smc-like protein, and golgi autoantigen golgin subfamily a4-like protein genes, complete cds blastn 15284 359 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
12940871 12940871 PRJNA1073183_P_NODE_17771_length_310_cov_8.995781_g17676_i0 PRJNA1073183 17771 310 8.995781 27.8869211 Philodina roseola 96448 Rotifera other_Eukaryota 231 3.47e-56   NTclustered gi|183178949|gb|EU432548.1| 96448 g17676 i0 89.189 3.98064516129032 185 20 60 0 1 185 34649 34465 Philodina roseola guanylyl cyclase gene, complete sequence; and TAR-protein (TAR_2), U1-like Zn-finger-containing protein (U1Zn_2), unknown (PruORF0001_2), unknown (PrPCG0001_2), methione sulfide reductase B (MSRB_2), Strabismus, serine-threonin kinase copy 2, plasma membrane calcium-dependent ATPase (CAse_2), myosin essential light chain (MELC_2), 82 kDa heat shock protein (hsp82_4), FBox-LRR protein (FBoxLRR_2), TPRA_2 (TPRA_2), phosphoribosylaminoimidazole carboxylase (PAICS_2), and unknown (PruORF0002_2) genes, complete cds blastn 1234 231 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
14216092 14216092 PRJNA1073183_P_NODE_33752_length_242_cov_0.911243_g33657_i0 PRJNA1073183 33752 242 0.911243 2.20520806 Philodina roseola 96448 Rotifera other_Eukaryota 159 1.2499999999999999e-34   NTclustered gi|183178964|gb|EU432549.1| 96448 g33657 i0 84.146 0.677685950413223 164 26 68 0 75 238 2362 2199 Philodina roseola 7 transmembrane receptor (rhodopsin family) A (7tmrA_3), 7 transmembrane receptor (rhodopsin family) B (7tmrB_3), transmembrane receptor (rhodopsin family) C (7tmrC_3), 7 transmembrane receptor (rhodopsin family) D (7tmrD_3), myosin essential light chain (MELC_3), ArkA_3 (arkA_3), ArkB_3 (arkB_3), ArkC_3 (arkC_3), TRPA_3 (TPRA_3), 82 kDa heat shock protein (hsp82_3), LicD_3 (LicD_3), low density lipoprotein receptor (LDL_3), Zn carboxypeptidase gene (Zncarb_3), phosphoribosylaminoimidazole carboxylase (PAICS_3), unknown (PrPCG0002_3), lung-like 7 transmembrane receptor (lung_3), and phosphoglycerate-bisphosphoglycerate mutase (PGAM_3) genes, complete cds blastn 164 159 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
16764406 16764406 PRJNA1073183_P_NODE_7294_length_472_cov_1.709273_g7200_i0 PRJNA1073183 7294 472 1.709273 8.06776856 Philodina sp. NPS-2005 317012 Rotifera other_Eukaryota 357 8.69e-94   NTclustered gi|62362199|gb|AY942839.1| 317012 g7200 i0 81.69 14.6525423728814 426 78 90 0 39 464 512 87 Philodina sp. NPS-2005 S14e ribosomal protein-like protein mRNA, complete cds blastn 6916 357 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. NPS-2005
18038823 18038823 PRJNA1073183_P_NODE_17295_length_315_cov_0.933884_g17200_i0 PRJNA1073183 17295 315 0.933884 2.9417346 Philodina roseola 96448 Rotifera other_Eukaryota 505 1.8799999999999995e-138   NTclustered gi|37785582|gb|AY210469.1| 96448 g17200 i0 95.597 58.3269841269841 318 8 100 5 1 315 2041 2355 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 18373 505 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
20588065 20588065 PRJNA1073183_P_NODE_10357_length_398_cov_4.855385_g10263_i0 PRJNA1073183 10357 398 4.855385 19.3244323 Rotaria rotatoria 231624 Rotifera other_Eukaryota 337 9.399999999999998e-88   NTclustered gi|270267490|ref|NC_013568.1| 231624 g10263 i0 82.398 1.51758793969849 392 63 98 6 10 398 10923 10535 Rotaria rotatoria mitochondrion, complete genome blastn 604 337 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
21863992 21863992 PRJNA1073183_P_NODE_1978_length_873_cov_2.462500_g1906_i0 PRJNA1073183 1978 873 2.4625 21.497625 Philodina roseola 96448 Rotifera other_Eukaryota 449 2.6699999999999995e-121   NTclustered gi|183178964|gb|EU432549.1| 96448 g1906 i0 86.7 3.20618556701031 406 52 56 2 306 710 19955 19551 Philodina roseola 7 transmembrane receptor (rhodopsin family) A (7tmrA_3), 7 transmembrane receptor (rhodopsin family) B (7tmrB_3), transmembrane receptor (rhodopsin family) C (7tmrC_3), 7 transmembrane receptor (rhodopsin family) D (7tmrD_3), myosin essential light chain (MELC_3), ArkA_3 (arkA_3), ArkB_3 (arkB_3), ArkC_3 (arkC_3), TRPA_3 (TPRA_3), 82 kDa heat shock protein (hsp82_3), LicD_3 (LicD_3), low density lipoprotein receptor (LDL_3), Zn carboxypeptidase gene (Zncarb_3), phosphoribosylaminoimidazole carboxylase (PAICS_3), unknown (PrPCG0002_3), lung-like 7 transmembrane receptor (lung_3), and phosphoglycerate-bisphosphoglycerate mutase (PGAM_3) genes, complete cds blastn 2799 449 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;