RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA1073183" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA1073183 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1461680 1461680 PRJNA1073183_P_NODE_18302_length_306_cov_1.317597_g18207_i0 PRJNA1073183 18302 306 1.317597 4.03184682 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 302 2.5700000000000002e-77   NTclustered gi|1002452915|ref|XM_015800795.1| 157538 g18207 i0 86.813 8.52287581699346 273 32 89 4 32 302 25 295 Leptomonas pyrrhocoris putative Ribosomal protein l3 mRNA blastn 2608 302 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
2737766 2737766 PRJNA1073183_P_NODE_22823_length_274_cov_1.228856_g22728_i0 PRJNA1073183 22823 274 1.228856 3.36706544 Herpetomonas muscarum 5718 Euglenozoa other_Eukaryota 294 3.79e-75   NTclustered gi|529495907|gb|KC503386.1| 5718 g22728 i0 86.296 26.5036496350365 270 37 99 0 3 272 1 270 Herpetomonas muscarum clone H1_2.5.1.6 methionine adenosyltransferase gene, complete cds blastn 7262 294 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Herpetomonas Herpetomonas muscarum
5289968 5289968 PRJNA1073183_P_NODE_20825_length_287_cov_1.060748_g20730_i0 PRJNA1073183 20825 287 1.060748 3.04434676 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 224 5.309999999999999e-54   NTclustered gi|1002452927|ref|XM_015800798.1| 157538 g20730 i0 81.455 9.93379790940767 275 49 95 2 7 280 967 694 Leptomonas pyrrhocoris putative Ribosomal protein l3 mRNA blastn 2851 224 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
10390466 10390466 PRJNA1073183_P_NODE_21189_length_285_cov_0.797170_g21094_i0 PRJNA1073183 21189 285 0.79717 2.2719345 Decastava sp. 3023511 Euglenozoa other_Eukaryota 442 1.3399999999999994e-119   NTclustered gi|2431695564|gb|OQ331009.1| 3023511 g21094 i0 94.792 23.319298245614 288 8 100 7 1 285 678 961 Decastava sp. isolate SPO2 small subunit ribosomal RNA gene, partial sequence blastn 6646 442 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava sp.
12494884 12494884 PRJNA1073183_P_NODE_17730_length_311_cov_1.268908_g17635_i0 PRJNA1073183 17730 311 1.268908 3.94630388 Leishmania 5658 Euglenozoa other_Eukaryota 178 4.6e-40   NTclustered gi|2593262068|emb|OY748521.1| 5660 g17635 i0 78.445 13.1736334405145 283 53 90 8 32 310 1422578 1422856 Leishmania braziliensis isolate MHOM/BR/75/M2903 genome assembly, chromosome: 35 blastn 4097 178 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
13769391 13769391 PRJNA1073183_P_NODE_17651_length_312_cov_0.962343_g17556_i0 PRJNA1073183 17651 312 0.962343 3.00251016 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 322 2.01e-83   NTclustered gi|9864198|gb|AF291716.1|AF291716 5660 g17556 i0 85.304 100.099358974359 313 44 100 2 1 312 1815 1504 Leishmania braziliensis heat shock protein 70 (hsp70) gene, complete cds blastn 31231 324 0.993827160493827 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
14216189 14216189 PRJNA1073183_P_NODE_8192_length_445_cov_1.655914_g8098_i0 PRJNA1073183 8192 445 1.655914 7.3688173 Trypanosoma vivax 5699 Euglenozoa other_Eukaryota 398 4.8000000000000005e-106   NTclustered gi|340055083|emb|HE573024.1| 1055687 g8098 i0 82.921 23.2651685393258 445 72 99 4 1 443 1332550 1332108 Trypanosoma vivax Y486 annotated genomic contig, chromosome 8 blastn 10353 398 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma vivax
18867682 18867682 PRJNA1073183_P_NODE_28395_length_249_cov_0.875000_g28300_i0 PRJNA1073183 28395 249 0.875 2.17875 Leishmania 5658 Euglenozoa other_Eukaryota 206 1.6299999999999998e-48   NTclustered gi|157870819|ref|XM_001683908.1| 347515 g28300 i0 82.114 11.6104417670683 246 39 97 5 3 244 442 686 Leishmania major strain Friedlin putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase partial mRNA blastn 2891 206 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania major
19312851 19312851 PRJNA1073183_P_NODE_19956_length_293_cov_1.045455_g19861_i0 PRJNA1073183 19956 293 1.045455 3.06318315 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 364 3.069999999999999e-96   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g19861 i0 89.037 136.672354948805 301 24 100 7 1 293 4774 4475 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 40045 364 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
23139663 23139663 PRJNA1073183_P_NODE_30579_length_246_cov_0.890173_g30484_i0 PRJNA1073183 30579 246 0.890173 2.18982558 Trypanosoma rangeli 5698 Euglenozoa other_Eukaryota 86.1 2.19e-12   NTclustered gi|1673172107|ref|XM_029386010.1| 5698 g30484 i0 85.542 2.79674796747967 83 10 33 2 40 121 940 1021 Trypanosoma rangeli ribonucleoside-diphosphate reductase subunit M2 (TraAM80_09318), partial mRNA blastn 688 86.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;