RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1073183" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1073183 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1461606 1461606 PRJNA1073183_P_NODE_12102_length_371_cov_2.577181_g12007_i0 PRJNA1073183 12102 371 2.577181 9.56134151 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 392 1.83e-104   NTclustered gi|2782844603|ref|XM_067056021.1| 252671 g12007 i0 88.959 82.1266846361186 317 35 85 0 1 317 1103 1419 PREDICTED: Clytia hemisphaerica tubulin beta-4B chain (LOC136799316), mRNA blastn 30469 392 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
5289877 5289877 PRJNA1073183_P_NODE_15285_length_333_cov_2.811538_g15190_i0 PRJNA1073183 15285 333 2.811538 9.36242154 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 279 1.32e-70   NTclustered gi|2782873191|ref|XM_067061560.1| 252671 g15190 i0 89.545 63.954954954955 220 23 66 0 112 331 1465 1246 PREDICTED: Clytia hemisphaerica tubulin alpha-2/alpha-4 chain (LOC136805028), mRNA blastn 21297 279 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
7839960 7839960 PRJNA1073183_P_NODE_30627_length_246_cov_0.890173_g30532_i0 PRJNA1073183 30627 246 0.890173 2.18982558 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2729067808|ref|XM_065195882.1| 499914 g30532 i0 100 0.609756097560976 30 0 12 0 105 134 314 343 PREDICTED: Rhopilema esculentum alpha-2Db adrenergic receptor-like (LOC135681415), transcript variant X5, mRNA blastn 150 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;