RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1073183" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1073183 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11666182 11666182 PRJNA1073183_P_NODE_9870_length_408_cov_1.605970_g9776_i0 PRJNA1073183 9870 408 1.60597 6.5523576 Fimicolochytrium jonesii 1396493 Fungi Fungi 128 6.3299999999999995e-25   NTclustered gi|2432097581|ref|XM_053071233.1| 1396493 g9776 i0 82.313 4.77941176470588 147 26 36 0 33 179 83 229 Fimicolochytrium jonesii 30S ribosomal protein S30e (EV422DRAFT_541825), mRNA blastn 1950 128 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
15489837 15489837 PRJNA1073183_P_NODE_23433_length_270_cov_1.147208_g23338_i0 PRJNA1073183 23433 270 1.147208 3.0974616 Fimicolochytrium jonesii 1396493 Fungi Fungi 172 1.82e-38   NTclustered gi|2432101286|ref|XM_053071357.1| 1396493 g23338 i0 84.571 59.0481481481482 175 25 64 2 75 248 523 350 Fimicolochytrium jonesii ribosomal protein L22/L17 (EV422DRAFT_543881), mRNA blastn 15943 172 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
16764278 16764278 PRJNA1073183_P_NODE_31494_length_245_cov_0.895349_g31399_i0 PRJNA1073183 31494 245 0.895349 2.19360505 Fimicolochytrium jonesii 1396493 Fungi Fungi 204 5.77e-48   NTclustered gi|2432090693|ref|XM_053070959.1| 1396493 g31399 i0 81.893 32.6897959183673 243 42 99 2 1 242 428 187 Fimicolochytrium jonesii 40S ribosomal protein S15 (EV422DRAFT_538211), mRNA blastn 8009 204 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
18039080 18039080 PRJNA1073183_P_NODE_33255_length_242_cov_1.366864_g33160_i0 PRJNA1073183 33255 242 1.366864 3.30781088 Spizellomyces punctatus 109760 Fungi Fungi 102 2.13e-17   NTclustered gi|1027025241|ref|XM_016756493.1| 645134 g33160 i0 94.03 1.23140495867769 67 4 28 0 93 159 1077 1011 Spizellomyces punctatus DAOM BR117 uncharacterized protein (SPPG_08336), mRNA blastn 298 102 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
21864088 21864088 PRJNA1073183_P_NODE_26098_length_252_cov_1.720670_g26003_i0 PRJNA1073183 26098 252 1.72067 4.3360884 Fimicolochytrium jonesii 1396493 Fungi Fungi 165 2.81e-36   NTclustered gi|2432084117|ref|XM_053070665.1| 1396493 g26003 i0 79.508 6.99206349206349 244 40 95 8 2 240 633 395 Fimicolochytrium jonesii P-loop containing nucleoside triphosphate hydrolase protein (EV422DRAFT_534391), mRNA blastn 1762 165 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;