contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA1073183" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187193 | 187193 | PRJNA1073183_P_NODE_20921_length_286_cov_1.305164_g20826_i0 | PRJNA1073183 | 20921 | 286 | 1.305164 | 3.73276904 | Crassaminicella indica | 2855394 | Bacteria | Bacteria | 58.4 | 5.68e-4 | NTclustered | gi|2065932699|gb|CP078093.1| | 2855394 | g20826 | i0 | 100 | 0.108391608391608 | 31 | 0 | 11 | 0 | 8 | 38 | 2682719 | 2682749 | Crassaminicella indica strain 143-21 chromosome, complete genome | blastn | 31 | 58.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Crassaminicella | Crassaminicella indica | ||
| 187359 | 187359 | PRJNA1073183_P_NODE_31581_length_245_cov_0.889535_g31486_i0 | PRJNA1073183 | 31581 | 245 | 0.889535 | 2.17936075 | Weissella confusa | 1583 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|2788849649|gb|CP166847.1| | 1583 | g31486 | i0 | 99.592 | 9 | 245 | 1 | 100 | 0 | 1 | 245 | 2110739 | 2110983 | Weissella confusa strain HYF86 chromosome HYF86, complete sequence | blastn | 2205 | 448 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella confusa | ||
| 3566696 | 3566696 | PRJNA1073183_P_NODE_29663_length_247_cov_0.885057_g29568_i0 | PRJNA1073183 | 29663 | 247 | 0.885057 | 2.18609079 | Streptococcus | 1301 | Bacteria | Bacteria | 435 | 1.9e-117 | NTclustered | gi|1988318086|gb|CP070238.1| | 1335 | g29568 | i0 | 98.381 | 15.9757085020243 | 247 | 4 | 100 | 0 | 1 | 247 | 45423 | 45669 | Streptococcus equinus strain Colony399 chromosome | blastn | 3946 | 435 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus equinus | ||
| 3566713 | 3566713 | PRJNA1073183_P_NODE_34763_length_235_cov_2.049383_g34668_i0 | PRJNA1073183 | 34763 | 235 | 2.049383 | 4.81605005 | Staphylococcus | 1279 | Bacteria | Bacteria | 435 | 1.79e-117 | NTclustered | gi|2482395019|gb|CP094927.1| | 1280 | g34668 | i0 | 100 | 558.268085106383 | 235 | 0 | 100 | 0 | 1 | 235 | 968680 | 968914 | Staphylococcus aureus strain 13 chromosome, complete genome | blastn | 131193 | 435 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 4844145 | 4844145 | PRJNA1073183_P_NODE_29044_length_248_cov_0.880000_g28949_i0 | PRJNA1073183 | 29044 | 248 | 0.88 | 2.1824 | root | 1 | Root_unresolved | Root_unresolved | 429 | 8.869999999999998e-116 | NTclustered | gi|1948576487|gb|CP065994.1| | 102684 | g28949 | i0 | 97.976 | 10.7258064516129 | 247 | 5 | 99 | 0 | 1 | 247 | 409267 | 409513 | Streptococcus infantarius strain FDAARGOS_1019 chromosome, complete genome | blastn | 2660 | 429 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus infantarius | ||
| 4844170 | 4844170 | PRJNA1073183_P_NODE_33924_length_242_cov_0.875740_g33829_i0 | PRJNA1073183 | 33924 | 242 | 0.87574 | 2.1192908 | Listeria | 1637 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|2611946659|gb|CP137276.1| | 1639 | g33829 | i0 | 99.587 | 100 | 242 | 1 | 100 | 0 | 1 | 242 | 345347 | 345106 | Listeria monocytogenes strain FV3 chromosome, complete genome | blastn | 24200 | 442 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 4844177 | 4844177 | PRJNA1073183_P_NODE_34804_length_232_cov_2.238994_g34709_i0 | PRJNA1073183 | 34804 | 232 | 2.238994 | 5.19446608 | Weissella | 46255 | Bacteria | Bacteria | 429 | 8.2e-116 | NTclustered | gi|2788849649|gb|CP166847.1| | 1583 | g34709 | i0 | 100 | 625.818965517241 | 232 | 0 | 100 | 0 | 1 | 232 | 20092 | 20323 | Weissella confusa strain HYF86 chromosome HYF86, complete sequence | blastn | 145190 | 429 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella confusa | ||
| 6119216 | 6119216 | PRJNA1073183_P_NODE_22745_length_274_cov_5.363184_g22650_i0 | PRJNA1073183 | 22745 | 274 | 5.363184 | 14.69512416 | root | 1 | Root_unresolved | Root_unresolved | 507 | 4.47e-139 | NTclustered | gi|1370563981|gb|CP027781.1| | 1491 | g22650 | i0 | 100 | 113.003649635036 | 274 | 0 | 100 | 0 | 1 | 274 | 4002055 | 4001782 | Clostridium botulinum strain MAP 5 chromosome, complete genome | blastn | 30963 | 507 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium botulinum | ||
| 6565056 | 6565056 | PRJNA1073183_P_NODE_17106_length_316_cov_2.279835_g17011_i0 | PRJNA1073183 | 17106 | 316 | 2.279835 | 7.2042786 | Ruminococcaceae bacterium BL-6 | 2799561 | Bacteria | Bacteria | 52.8 | 0.03 | NTclustered | gi|1862835799|emb|LR778135.1| | 2799561 | g17011 | i0 | 100 | 0.0886075949367089 | 28 | 0 | 9 | 0 | 86 | 113 | 337186 | 337159 | Clostridiales bacterium isolate BL-6 genome assembly, chromosome: CLOSBL6 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Ruminococcaceae bacterium BL-6 | |||
| 6565356 | 6565356 | PRJNA1073183_P_NODE_32686_length_243_cov_0.905882_g32591_i0 | PRJNA1073183 | 32686 | 243 | 0.905882 | 2.20129326 | Staphylococcus cohnii | 29382 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|1373834432|emb|LT963440.1| | 29382 | g32591 | i0 | 100 | 24.7242798353909 | 243 | 0 | 100 | 0 | 1 | 243 | 1949423 | 1949665 | Staphylococcus cohnii isolate Staphylococcus cohnii ATCC 29974 genome assembly, chromosome: I | blastn | 6008 | 449 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus cohnii | ||
| 9944274 | 9944274 | PRJNA1073183_P_NODE_33668_length_242_cov_0.911243_g33573_i0 | PRJNA1073183 | 33668 | 242 | 0.911243 | 2.20520806 | Staphylococcus | 1279 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|1395792743|gb|CP029653.1| | 1280 | g33573 | i0 | 99.587 | 72.8347107438017 | 242 | 1 | 100 | 0 | 1 | 242 | 76708 | 76949 | Staphylococcus aureus strain AR_0470 chromosome, complete genome | blastn | 17626 | 442 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 11219521 | 11219521 | PRJNA1073183_P_NODE_26589_length_251_cov_0.865169_g26494_i0 | PRJNA1073183 | 26589 | 251 | 0.865169 | 2.17157419 | Streptococcus | 1301 | Bacteria | Bacteria | 436 | 5.369999999999999e-118 | NTclustered | gi|1948576487|gb|CP065994.1| | 102684 | g26494 | i0 | 98.008 | 101.569721115538 | 251 | 5 | 100 | 0 | 1 | 251 | 1818964 | 1819214 | Streptococcus infantarius strain FDAARGOS_1019 chromosome, complete genome | blastn | 25494 | 436 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus infantarius | ||
| 12940996 | 12940996 | PRJNA1073183_P_NODE_25231_length_258_cov_1.572973_g25136_i0 | PRJNA1073183 | 25231 | 258 | 1.572973 | 4.05827034 | Staphylococcus hominis | 1290 | Bacteria | Bacteria | 477 | 3.2699999999999985e-130 | NTclustered | gi|1780389983|gb|CP046301.1| | 1290 | g25136 | i0 | 100 | 73.0271317829457 | 258 | 0 | 100 | 0 | 1 | 258 | 1760161 | 1760418 | Staphylococcus hominis strain FDAARGOS_747 chromosome, complete genome | blastn | 18841 | 477 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 14215883 | 14215883 | PRJNA1073183_P_NODE_22932_length_273_cov_1.540000_g22837_i0 | PRJNA1073183 | 22932 | 273 | 1.54 | 4.2042 | Anaerococcus prevotii | 33034 | Bacteria | Bacteria | 460 | 3.5099999999999996e-125 | NTclustered | gi|256797400|gb|CP001708.1| | 525919 | g22837 | i0 | 97.07 | 2.83516483516484 | 273 | 8 | 100 | 0 | 1 | 273 | 46362 | 46634 | Anaerococcus prevotii DSM 20548, complete genome | blastn | 774 | 460 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus prevotii | ||
| 16764190 | 16764190 | PRJNA1073183_P_NODE_27194_length_250_cov_0.870056_g27099_i0 | PRJNA1073183 | 27194 | 250 | 0.870056 | 2.17514 | Staphylococcus hominis | 1290 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2870745991|gb|CP134693.1| | 1290 | g27099 | i0 | 100 | 547 | 250 | 0 | 100 | 0 | 1 | 250 | 11403 | 11154 | Staphylococcus hominis strain acrlw chromosome, complete genome | blastn | 136750 | 462 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 16764245 | 16764245 | PRJNA1073183_P_NODE_30054_length_247_cov_0.885057_g29959_i0 | PRJNA1073183 | 30054 | 247 | 0.885057 | 2.18609079 | Weissella confusa | 1583 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|1611612124|gb|CP027563.1| | 1583 | g29959 | i0 | 100 | 9.0080971659919 | 247 | 0 | 100 | 0 | 1 | 247 | 1518742 | 1518496 | Weissella confusa strain VTT E-133279 chromosome, complete genome | blastn | 2225 | 457 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella confusa | ||
| 17593847 | 17593847 | PRJNA1073183_P_NODE_24814_length_261_cov_1.404255_g24719_i0 | PRJNA1073183 | 24814 | 261 | 1.404255 | 3.66510555 | Staphylococcus | 1279 | Bacteria | Bacteria | 472 | 1.54e-128 | NTclustered | gi|944018403|gb|KJ923785.1| | 1280 | g24719 | i0 | 99.234 | 157.003831417625 | 261 | 2 | 100 | 0 | 1 | 261 | 439 | 179 | Staphylococcus aureus strain SBANHCA2 16S ribosomal RNA gene, partial sequence | blastn | 40978 | 472 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 18039068 | 18039068 | PRJNA1073183_P_NODE_32595_length_243_cov_0.905882_g32500_i0 | PRJNA1073183 | 32595 | 243 | 0.905882 | 2.20129326 | Weissella cibaria | 137591 | Bacteria | Bacteria | 438 | 1.4399999999999996e-118 | NTclustered | gi|2213883668|gb|CP058240.1| | 137591 | g32500 | i0 | 99.177 | 22.8559670781893 | 243 | 2 | 100 | 0 | 1 | 243 | 4035 | 3793 | Weissella cibaria strain JW15 plasmid pCBA3612-03, complete sequence | blastn | 5554 | 438 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella cibaria | ||
| 18039097 | 18039097 | PRJNA1073183_P_NODE_34075_length_241_cov_0.916667_g33980_i0 | PRJNA1073183 | 34075 | 241 | 0.916667 | 2.20916747 | Weissella confusa | 1583 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|2788849649|gb|CP166847.1| | 1583 | g33980 | i0 | 100 | 16.7883817427386 | 241 | 0 | 100 | 0 | 1 | 241 | 172224 | 172464 | Weissella confusa strain HYF86 chromosome HYF86, complete sequence | blastn | 4046 | 446 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella confusa | ||
| 18867636 | 18867636 | PRJNA1073183_P_NODE_14855_length_337_cov_2.685606_g14760_i0 | PRJNA1073183 | 14855 | 337 | 2.685606 | 9.05049222 | Streptococcus | 1301 | Bacteria | Bacteria | 601 | 2.52e-167 | NTclustered | gi|1943211519|gb|CP065707.1| | 1303 | g14760 | i0 | 98.813 | 544.008902077151 | 337 | 4 | 100 | 0 | 1 | 337 | 424319 | 423983 | Streptococcus oralis strain FDAARGOS_885 chromosome, complete genome | blastn | 183331 | 601 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 18867711 | 18867711 | PRJNA1073183_P_NODE_6835_length_486_cov_2.639225_g6741_i0 | PRJNA1073183 | 6835 | 486 | 2.639225 | 12.8266335 | Enterococcus | 1350 | Bacteria | Bacteria | 793 | 0 | NTclustered | gi|2737618408|gb|CP144496.1| | 44008 | g6741 | i0 | 96.091 | 574.518518518518 | 486 | 19 | 100 | 0 | 1 | 486 | 1758890 | 1758405 | Enterococcus cecorum strain 67 chromosome, complete genome | blastn | 279216 | 793 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus cecorum | ||
| 20588263 | 20588263 | PRJNA1073183_P_NODE_23537_length_269_cov_1.244898_g23442_i0 | PRJNA1073183 | 23537 | 269 | 1.244898 | 3.34877562 | Weissella confusa | 1583 | Bacteria | Bacteria | 492 | 1.23e-134 | NTclustered | gi|1815810266|gb|CP049097.1| | 1583 | g23442 | i0 | 99.628 | 6.98513011152416 | 269 | 1 | 100 | 0 | 1 | 269 | 1083392 | 1083660 | Weissella confusa strain N17 chromosome, complete genome | blastn | 1879 | 492 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella confusa | ||
| 21418146 | 21418146 | PRJNA1073183_P_NODE_31457_length_245_cov_0.895349_g31362_i0 | PRJNA1073183 | 31457 | 245 | 0.895349 | 2.19360505 | Bacillus | 1386 | Bacteria | Bacteria | 451 | 1.87e-122 | NTclustered | gi|2263617782|gb|CP099801.1| | 2026186 | g31362 | i0 | 100 | 100.081632653061 | 244 | 0 | 99 | 0 | 1 | 244 | 4176843 | 4176600 | Bacillus paranthracis strain SSBC101 chromosome, complete genome | blastn | 24520 | 451 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus paranthracis | ||
| 21418162 | 21418162 | PRJNA1073183_P_NODE_3817_length_644_cov_2.038529_g3728_i0 | PRJNA1073183 | 3817 | 644 | 2.038529 | 13.12812676 | Weissella | 46255 | Bacteria | Bacteria | 1190 | 0 | NTclustered | gi|2788849649|gb|CP166847.1| | 1583 | g3728 | i0 | 100 | 627.366459627329 | 644 | 0 | 100 | 0 | 1 | 644 | 20997 | 20354 | Weissella confusa strain HYF86 chromosome HYF86, complete sequence | blastn | 404024 | 1190 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella confusa | ||
| 23139738 | 23139738 | PRJNA1073183_P_NODE_34579_length_241_cov_0.916667_g34484_i0 | PRJNA1073183 | 34579 | 241 | 0.916667 | 2.20916747 | Weissella confusa | 1583 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|1815810266|gb|CP049097.1| | 1583 | g34484 | i0 | 100 | 24.0912863070539 | 241 | 0 | 100 | 0 | 1 | 241 | 1538865 | 1538625 | Weissella confusa strain N17 chromosome, complete genome | blastn | 5806 | 446 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella confusa |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;