contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA1073005" and tax_clade = "Amoebozoa"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 186983 | 186983 | PRJNA1073005_P_NODE_3181_length_595_cov_6.808429_g3063_i0 | PRJNA1073005 | 3181 | 595 | 6.808429 | 40.51015255 | Ptolemeba bulliensis | 1525729 | Tubulinea | other_Eukaryota | 1029 | 0 | NTclustered | gi|667752759|gb|KJ542108.1| | 1525729 | g3063 | i0 | 97.987 | 85.527731092437 | 596 | 6 | 100 | 3 | 1 | 595 | 1867 | 1277 | Ptolemeba bulliensis isolate Sk13-4e 18S ribosomal RNA gene, partial sequence | blastn | 50889 | 1029 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Ptolemeba | Ptolemeba bulliensis | ||
| 1461544 | 1461544 | PRJNA1073005_P_NODE_3022_length_615_cov_8.525830_g2904_i0 | PRJNA1073005 | 3022 | 615 | 8.52583 | 52.4338545 | Ptolemeba bulliensis | 1525729 | Tubulinea | other_Eukaryota | 1007 | 0 | NTclustered | gi|1255287465|dbj|LC272073.1| | 1525729 | g2904 | i0 | 96.423 | 74.8439024390244 | 615 | 15 | 100 | 6 | 1 | 615 | 595 | 1202 | Ptolemeba bulliensis gene for 18S ribosomal RNA, partial sequence, strain: BA02 | blastn | 46029 | 1007 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Ptolemeba | Ptolemeba bulliensis | ||
| 1461558 | 1461558 | PRJNA1073005_P_NODE_8142_length_278_cov_1.126829_g8023_i0 | PRJNA1073005 | 8142 | 278 | 1.126829 | 3.13258462 | Arcella discoides | 1078856 | Tubulinea | other_Eukaryota | 279 | 1.08e-70 | NTclustered | gi|345452540|gb|JF694288.1| | 1078856 | g8023 | i0 | 84.946 | 58.431654676259 | 279 | 38 | 99 | 4 | 2 | 278 | 642 | 366 | Arcella discoides isolate DL3_98 clone 2 actin gene, partial cds | blastn | 16244 | 279 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Arcellidae | Arcella | Arcella discoides | ||
| 2737537 | 2737537 | PRJNA1073005_P_NODE_7443_length_304_cov_2.095238_g7324_i0 | PRJNA1073005 | 7443 | 304 | 2.095238 | 6.36952352 | Amoeba leningradensis | 160820 | Tubulinea | other_Eukaryota | 305 | 1.97e-78 | NTclustered | gi|17897590|emb|AJ314605.1| | 160820 | g7324 | i0 | 84.936 | 50.5460526315789 | 312 | 36 | 100 | 9 | 1 | 304 | 1294 | 1602 | Amoeba leningradensis partial 16S rRNA gene, strain CCAP 1503/6 | blastn | 15366 | 305 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba leningradensis | ||
| 7839595 | 7839595 | PRJNA1073005_P_NODE_4327_length_477_cov_1.193069_g4208_i0 | PRJNA1073005 | 4327 | 477 | 1.193069 | 5.69093913 | Vexillifera expectata | 1789827 | Discosea | other_Eukaryota | 634 | 3.619999999999999e-177 | NTclustered | gi|1042160925|dbj|LC102269.1| | 1789827 | g4208 | i0 | 90.737 | 99.6918238993711 | 475 | 44 | 99 | 0 | 1 | 475 | 526 | 52 | Vexillifera expectata gene for actin, partial cds, strain: 4730_cl4 | blastn | 47553 | 634 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Dactylopodida | Vexilliferidae | Vexillifera | Vexillifera expectata | ||
| 7839601 | 7839601 | PRJNA1073005_P_NODE_6347_length_354_cov_1.284698_g6228_i0 | PRJNA1073005 | 6347 | 354 | 1.284698 | 4.54783092 | Vannella sp. | 1973054 | Discosea | other_Eukaryota | 645 | 1.2099999999999996e-180 | NTclustered | gi|2169663314|gb|OL989990.1| | 1973054 | g6228 | i0 | 99.435 | 97.7316384180791 | 354 | 2 | 100 | 0 | 1 | 354 | 1388 | 1741 | Vannella sp. isolate P147 small subunit ribosomal RNA gene, partial sequence | blastn | 34597 | 645 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Vannella | Vannella sp. | |||
| 10390273 | 10390273 | PRJNA1073005_P_NODE_6889_length_329_cov_0.976562_g6770_i0 | PRJNA1073005 | 6889 | 329 | 0.976562 | 3.21288898 | Cavenderia fasciculata | 261658 | Evosea | other_Eukaryota | 52.8 | 0.031 | NTclustered | gi|470247896|ref|XM_004366774.1| | 261658 | g6770 | i0 | 100 | 0.0851063829787234 | 28 | 0 | 9 | 0 | 225 | 252 | 1265 | 1238 | Cavenderia fasciculata uncharacterized protein (DFA_02446), partial mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Cavenderiaceae | Cavenderia | Cavenderia fasciculata | ||
| 11665626 | 11665626 | PRJNA1073005_P_NODE_4310_length_478_cov_2.185185_g4191_i0 | PRJNA1073005 | 4310 | 478 | 2.185185 | 10.4451843 | Chaos nobile | 160822 | Tubulinea | other_Eukaryota | 499 | 1.38e-136 | NTclustered | gi|17902587|emb|AJ314606.1| | 160822 | g4191 | i0 | 91.105 | 76.4644351464435 | 371 | 29 | 77 | 4 | 111 | 478 | 942 | 1311 | Chaos nobile partial 16S rRNA gene, strain CCAP 1511/2 | blastn | 36550 | 499 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Chaos | Chaos nobile | ||
| 12940717 | 12940717 | PRJNA1073005_P_NODE_2851_length_640_cov_9.380952_g2735_i0 | PRJNA1073005 | 2851 | 640 | 9.380952 | 60.0380928 | Cochliopodium minus | 313997 | Discosea | other_Eukaryota | 809 | 0 | NTclustered | gi|330902862|gb|JF298257.1| | 313997 | g2735 | i0 | 90.358 | 52.70625 | 643 | 25 | 97 | 21 | 1 | 621 | 631 | 4 | Cochliopodium minus 18S ribosomal RNA gene, partial sequence | blastn | 33732 | 809 | 1 | Eukaryota | Amoebozoa | Discosea | Himatismenida | Cochliopodiidae | Cochliopodium | Cochliopodium minus | |||
| 16763886 | 16763886 | PRJNA1073005_P_NODE_10194_length_242_cov_0.911243_g10075_i0 | PRJNA1073005 | 10194 | 242 | 0.911243 | 2.20520806 | Thecamoeba similis | 242545 | Discosea | other_Eukaryota | 298 | 2.54e-76 | NTclustered | gi|33946350|gb|AY294154.1| | 242545 | g10075 | i0 | 89.121 | 91.8512396694215 | 239 | 26 | 99 | 0 | 4 | 242 | 41 | 279 | Thecamoeba similis actin mRNA, complete cds | blastn | 22228 | 298 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Thecamoebida | Thecamoeba | Thecamoeba similis | |||
| 18038674 | 18038674 | PRJNA1073005_P_NODE_1935_length_802_cov_3.039781_g1836_i0 | PRJNA1073005 | 1935 | 802 | 3.039781 | 24.37904362 | Cochliopodium minus | 313997 | Discosea | other_Eukaryota | 900 | 0 | NTclustered | gi|330902862|gb|JF298257.1| | 313997 | g1836 | i0 | 87.728 | 53.5324189526185 | 823 | 33 | 100 | 35 | 1 | 802 | 2216 | 1441 | Cochliopodium minus 18S ribosomal RNA gene, partial sequence | blastn | 42933 | 900 | 1 | Eukaryota | Amoebozoa | Discosea | Himatismenida | Cochliopodiidae | Cochliopodium | Cochliopodium minus | |||
| 19312649 | 19312649 | PRJNA1073005_P_NODE_2576_length_682_cov_4.111658_g2462_i0 | PRJNA1073005 | 2576 | 682 | 4.111658 | 28.04150756 | Cochliopodium minus | 313997 | Discosea | other_Eukaryota | 745 | 0 | NTclustered | gi|330902862|gb|JF298257.1| | 313997 | g2462 | i0 | 86.364 | 57.4604105571848 | 726 | 43 | 100 | 33 | 1 | 682 | 644 | 1357 | Cochliopodium minus 18S ribosomal RNA gene, partial sequence | blastn | 39188 | 745 | 1 | Eukaryota | Amoebozoa | Discosea | Himatismenida | Cochliopodiidae | Cochliopodium | Cochliopodium minus | |||
| 19312652 | 19312652 | PRJNA1073005_P_NODE_3456_length_563_cov_2.206122_g3337_i0 | PRJNA1073005 | 3456 | 563 | 2.206122 | 12.42046686 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 483 | 1.66e-131 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g3337 | i0 | 81.9 | 4.101243339254 | 558 | 93 | 98 | 4 | 13 | 563 | 570 | 14 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 2309 | 483 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 19312668 | 19312668 | PRJNA1073005_P_NODE_8716_length_258_cov_1.335135_g8597_i0 | PRJNA1073005 | 8716 | 258 | 1.335135 | 3.4446483 | Platyamoeba placida | 3454475 | Discosea | other_Eukaryota | 316 | 7.539999999999998e-82 | NTclustered | gi|33946348|gb|AY294153.1| | 197527 | g8597 | i0 | 88.76 | 98.1976744186046 | 258 | 29 | 100 | 0 | 1 | 258 | 565 | 308 | Platyamoeba placida actin mRNA, partial cds | blastn | 25335 | 316 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Platyamoeba | Platyamoeba placida |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;