RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1069776" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1069776 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2735654 2735654 PRJNA1069776_S_NODE_6443_length_348_cov_962.157377_g6129_i0 PRJNA1069776 6443 348 962.157377 3348.30767196 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 320 8.18e-83   NTclustered gi|56757963|gb|AY815390.1| 6182 g6129 i0 97.849 129.295977011494 186 3 100 1 164 348 1720 1905 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 44995 320 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
4011058 4011058 PRJNA1069776_S_NODE_16184_length_257_cov_3.682243_g15870_i0 PRJNA1069776 16184 257 3.682243 9.46336451 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 263 9.92e-66   NTclustered gi|60700756|gb|AY915859.1| 6182 g15870 i0 91.192 2.22178988326848 193 17 75 0 40 232 193 1 Schistosoma japonicum SJCHGC09793 protein mRNA, complete cds blastn 571 263 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
5287613 5287613 PRJNA1069776_S_NODE_33165_length_188_cov_6.179310_g32851_i0 PRJNA1069776 33165 188 6.17931 11.6171028 Monotoplana cf. diorchis 104924 Platyhelminthes Platyhelminthes 73.1 1.24e-8   NTclustered gi|10944981|emb|AJ270174.1| 104924 g32851 i0 100 20.7340425531915 39 0 21 0 85 123 1633 1595 Monotoplana cf. diorchis partial 28S rRNA gene blastn 3898 73.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Proseriata Monotoplanidae Monotoplana Monotoplana cf. diorchis
9112661 9112661 PRJNA1069776_S_NODE_6728_length_344_cov_1245.382060_g6414_i0 PRJNA1069776 6728 344 1245.38206 4284.1142864 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 318 2.909999999999999e-82   NTclustered gi|56757963|gb|AY815390.1| 6182 g6414 i0 98.352 132.212209302326 182 2 100 1 1 181 1905 1724 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 45481 318 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
10388151 10388151 PRJNA1069776_S_NODE_41349_length_170_cov_4.535433_g41035_i0 PRJNA1069776 41349 170 4.535433 7.7102361 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 215 1.71e-51   NTclustered gi|60691997|gb|AY915382.1| 6182 g41035 i0 89.412 23.1882352941176 170 18 100 0 1 170 183 352 Schistosoma japonicum SJCHGC05510 protein mRNA, partial cds blastn 3942 215 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
12938425 12938425 PRJNA1069776_S_NODE_22711_length_222_cov_7.178771_g22397_i0 PRJNA1069776 22711 222 7.178771 15.93687162 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 315 2.27e-81   NTclustered gi|60698688|gb|AY915747.1| 6182 g22397 i0 93.81 2.28378378378378 210 12 96 1 14 222 296 87 Schistosoma japonicum SJCHGC09661 protein mRNA, partial cds blastn 507 315 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;