RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1069776" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1069776 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4011226 4011226 PRJNA1069776_S_NODE_28924_length_200_cov_2.917197_g28610_i0 PRJNA1069776 28924 200 2.917197 5.834394 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g28610 i0 100 0.29 30 0 15 0 171 200 38 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 58 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
9112465 9112465 PRJNA1069776_S_NODE_38908_length_175_cov_3.272727_g38594_i0 PRJNA1069776 38908 175 3.272727 5.72727225 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.015   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g38594 i0 100 0.16 28 0 16 0 148 175 38 11 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
10387817 10387817 PRJNA1069776_S_NODE_15569_length_261_cov_1.935780_g15255_i0 PRJNA1069776 15569 261 1.93578 5.0523858 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g15255 i0 100 0.540229885057471 29 0 11 0 233 261 38 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
14213405 14213405 PRJNA1069776_S_NODE_27272_length_205_cov_5.333333_g26958_i0 PRJNA1069776 27272 205 5.333333 10.93333265 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 58.4 3.85e-4   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g26958 i0 100 0.585365853658537 31 0 15 0 1 31 12 42 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 120 58.4 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
19310453 19310453 PRJNA1069776_S_NODE_34976_length_184_cov_2.375887_g34662_i0 PRJNA1069776 34976 184 2.375887 4.37163208 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 60.2 9.38e-5   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g34662 i0 100 0.326086956521739 32 0 17 0 153 184 40 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 60 60.2 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
21861420 21861420 PRJNA1069776_S_NODE_15798_length_259_cov_5.157407_g15484_i0 PRJNA1069776 15798 259 5.157407 13.35768413 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g15484 i0 100 0.22007722007722 29 0 11 0 231 259 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
21861639 21861639 PRJNA1069776_S_NODE_31878_length_192_cov_1.986577_g31564_i0 PRJNA1069776 31878 192 1.986577 3.81422784 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.017   NTclustered gi|829164250|ref|XM_971804.2| 312017 g31564 i0 96.774 0.161458333333333 31 1 16 0 142 172 1836 1806 Tetrahymena thermophila SB210 transmembrane protein, putative partial mRNA blastn 31 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;