RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1068830" and tax_phylum = "Preplasmiviricota"

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tax_superkingdom 1

tax_phylum 1

  • Preplasmiviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1068830 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4009207 4009207 PRJNA1068830_P_NODE_4164_length_1257_cov_23.336149_g57_i1 PRJNA1068830 4164 1257 23.336149 293.33539293 Yunan rodent mastadenovirus 3 3386056 Viruses Viruses 686 0   NTclustered gi|2902559670|gb|PQ678111.1| 3386056 g57 i1 83.531 0.60381861575179 759 99 60 14 247 999 1251 513 MAG: Yunan rodent mastadenovirus 3 isolate LCGM-YNSC172 pV protein and pX protein genes, complete cds; and pVI protein gene, partial cds blastn 759 686 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Yunan rodent mastadenovirus 3
11661209 11661209 PRJNA1068830_P_NODE_3530_length_1348_cov_6.532549_g3198_i0 PRJNA1068830 3530 1348 6.532549 88.05876052 Yunan rodent mastadenovirus 3 3386056 Viruses Viruses 1048 0   NTclustered gi|2902559680|gb|PQ678114.1| 3386056 g3198 i0 82.377 2.38575667655786 1220 200 98 8 132 1348 1583 376 MAG: Yunan rodent mastadenovirus 3 isolate LCGM-YNSC172 22 kDa protein and pVIII protein genes, complete cds; and fiber protein gene, partial cds blastn 3216 1048 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Yunan rodent mastadenovirus 3
21860708 21860708 PRJNA1068830_P_NODE_87358_length_243_cov_0.917647_g86655_i0 PRJNA1068830 87358 243 0.917647 2.22988221 Yunan rodent mastadenovirus 3 3386056 Viruses Viruses 285 1.98e-72   NTclustered gi|2902559663|gb|PQ678109.1| 3386056 g86655 i0 91.346 0.8559670781893 208 18 86 0 2 209 3254 3461 MAG: Yunan rodent mastadenovirus 3 isolate LCGM-YNSC172 DNA polymerase gene, partial cds; pTP protein gene, complete cds; and 52 kDa protein gene, partial cds blastn 208 285 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Yunan rodent mastadenovirus 3
24408037 24408037 PRJNA1068830_P_NODE_12840_length_692_cov_3.336026_g12173_i0 PRJNA1068830 12840 692 3.336026 23.08529992 Yunan rodent mastadenovirus 3 3386056 Viruses Viruses 481 7.43e-131   NTclustered gi|2902559676|gb|PQ678113.1| 3386056 g12173 i0 79.191 1 692 144 100 0 1 692 1731 1040 MAG: Yunan rodent mastadenovirus 3 isolate LCGM-YNSC172 genomic sequence blastn 692 481 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Yunan rodent mastadenovirus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;