RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1068830" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1068830 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1458221 1458221 PRJNA1068830_P_NODE_76162_length_250_cov_1.762712_g75459_i0 PRJNA1068830 76162 250 1.762712 4.40678 Rhizophagus irregularis 588596 Fungi Fungi 56.5 0.002   NTclustered gi|2749780951|ref|XM_025316625.2| 588596 g75459 i0 100 0.24 30 0 12 0 36 65 851 880 Rhizophagus irregularis uncharacterized protein (OCT59_020844), mRNA blastn 60 56.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
9109887 9109887 PRJNA1068830_P_NODE_23688_length_483_cov_1.075610_g22987_i0 PRJNA1068830 23688 483 1.07561 5.1951963 Gamsiella multidivaricata 101098 Fungi Fungi 213 2.04e-50   NTclustered gi|2323782935|ref|XM_051559344.1| 101098 g22987 i0 79.114 41.4202898550725 316 60 65 5 71 383 690 378 Gamsiella multidivaricata 60S ribosomal protein L21-A (BC939DRAFT_487056), mRNA blastn 20006 213 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
10386789 10386789 PRJNA1068830_P_NODE_72449_length_253_cov_0.866667_g71746_i0 PRJNA1068830 72449 253 0.866667 2.19266751 Rhizomucor pusillus 4840 Fungi Fungi 58.4 4.93e-4   NTclustered gi|2837731458|ref|XM_069388438.1| 4840 g71746 i0 100 0.122529644268775 31 0 12 0 134 164 702 672 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_9229), partial mRNA blastn 31 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
18034671 18034671 PRJNA1068830_P_NODE_50775_length_307_cov_1.645299_g50072_i0 PRJNA1068830 50775 307 1.645299 5.05106793 Mycotypha africana 64632 Fungi Fungi 54.7 0.008   NTclustered gi|2432558454|ref|XM_053079998.1| 64632 g50072 i0 100 0.0944625407166124 29 0 9 0 129 157 512 484 Mycotypha africana cytochrome P450 (BDF20DRAFT_851014), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;