RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1068830" and tax_kingdom = "Orthornavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 12 ✖

bioproject 1

  • PRJNA1068830 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1457638 1457638 PRJNA1068830_P_NODE_52742_length_301_cov_0.754386_g52039_i0 PRJNA1068830 52742 301 0.754386 2.27070186 Macrobrachium rosenbergii levi-like virus 1 3132580 Viruses Viruses 501 2.31e-137   NTclustered gi|2697475155|gb|PP215172.1| 3132580 g52039 i0 96.678 3.33887043189369 301 10 100 0 1 301 2266 2566 Macrobrachium rosenbergii levi-like virus 1 isolate 01/JS/201906 glycoprotein, hypothetical protein, and RNA-dependent RNA polymerase genes, complete cds blastn 1005 501 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Macrobrachium rosenbergii levi-like virus 1
4009411 4009411 PRJNA1068830_P_NODE_4_length_6313_cov_9.050801_g2_i0 PRJNA1068830 4 6313 9.050801 571.37706713 Lentinula eaodes hypovirus 2 2992848 Viruses Viruses 4324 0   NTclustered gi|2324991072|gb|OK636212.1| 2992848 g2 i0 79.118 0.998257563757326 6302 1290 99 26 23 6311 8429 2141 Lentinula eaodes hypovirus 2 isolate LED2-8 RNA-dependent RNA polymerase (RdRp) gene, complete cds blastn 6302 4324 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae Hypovirus Lentinula eaodes hypovirus 2
7834790 7834790 PRJNA1068830_P_NODE_1887_length_1721_cov_2.976335_g1682_i0 PRJNA1068830 1887 1721 2.976335 51.22272535 Macrobrachium rosenbergii levi-like virus 1 3132580 Viruses Viruses 2663 0   NTclustered gi|2697475155|gb|PP215172.1| 3132580 g1682 i0 95.816 3.03021499128414 1649 69 96 0 1 1649 3418 1770 Macrobrachium rosenbergii levi-like virus 1 isolate 01/JS/201906 glycoprotein, hypothetical protein, and RNA-dependent RNA polymerase genes, complete cds blastn 5215 2663 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Macrobrachium rosenbergii levi-like virus 1
7836248 7836248 PRJNA1068830_P_NODE_7_length_6159_cov_12.035491_g4_i0 PRJNA1068830 7 6159 12.035491 741.26589069 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2824 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g4 i0 95.674 0.659360285760675 1757 72 66 4 4405 6159 5329 7083 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4061 2824 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
7836539 7836539 PRJNA1068830_P_NODE_9127_length_841_cov_3.420573_g8501_i0 PRJNA1068830 9127 841 3.420573 28.76701893 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 1275 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g8501 i0 93.936 1 841 51 100 0 1 841 6985 6145 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 841 1275 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
10386556 10386556 PRJNA1068830_P_NODE_63389_length_273_cov_1.000000_g62686_i0 PRJNA1068830 63389 273 1 2.73 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 202 2.3499999999999996e-47   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g62686 i0 93.985 0.487179487179487 133 8 49 0 1 133 5047 4915 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 133 202 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
12937637 12937637 PRJNA1068830_P_NODE_8551_length_872_cov_2.994994_g7942_i0 PRJNA1068830 8551 872 2.994994 26.11634768 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 1118 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g7942 i0 98.276 0.731651376146789 638 11 73 0 81 718 639 2 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 638 1118 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
14211258 14211258 PRJNA1068830_P_NODE_34852_length_381_cov_2.646104_g34149_i0 PRJNA1068830 34852 381 2.646104 10.08165624 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 527 4.949999999999999e-145   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g34149 i0 92.432 0.971128608923885 370 26 97 2 13 381 6107 5739 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 370 527 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
16760060 16760060 PRJNA1068830_P_NODE_59414_length_282_cov_1.866029_g58711_i0 PRJNA1068830 59414 282 1.866029 5.26220178 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 473 4.679999999999999e-129   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g58711 i0 97.153 0.99645390070922 281 6 99 2 3 282 5401 5680 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 281 473 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
18035046 18035046 PRJNA1068830_P_NODE_65475_length_268_cov_1.200000_g64772_i0 PRJNA1068830 65475 268 1.2 3.216 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 171 6.489999999999999e-38   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g64772 i0 93.103 0.43283582089552203 116 8 43 0 1 116 1588 1703 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 116 171 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
20583902 20583902 PRJNA1068830_P_NODE_43677_length_334_cov_8.681992_g42974_i0 PRJNA1068830 43677 334 8.681992 28.99785328 Macrobrachium rosenbergii levi-like virus 1 3132580 Viruses Viruses 479 1.2199999999999996e-130   NTclustered gi|2697475155|gb|PP215172.1| 3132580 g42974 i0 92.749 1.58083832335329 331 24 99 0 4 334 341 11 Macrobrachium rosenbergii levi-like virus 1 isolate 01/JS/201906 glycoprotein, hypothetical protein, and RNA-dependent RNA polymerase genes, complete cds blastn 528 479 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Macrobrachium rosenbergii levi-like virus 1
21859495 21859495 PRJNA1068830_P_NODE_39198_length_356_cov_1.639576_g38495_i0 PRJNA1068830 39198 356 1.639576 5.83689056 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 532 9.869999999999998e-147   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g38495 i0 93.785 0.99438202247191 354 22 99 0 3 356 2185 2538 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 354 532 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;