contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA1068830" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1014311 | 1014311 | PRJNA1068830_P_NODE_71641_length_254_cov_1.464088_g70938_i0 | PRJNA1068830 | 71641 | 254 | 1.464088 | 3.71878352 | Akkermansia | 239934 | Bacteria | Bacteria | 246 | 9.859999999999999e-61 | NTclustered | gi|1805906055|gb|CP027004.1| | 239935 | g70938 | i0 | 100 | 49.1692913385827 | 133 | 0 | 52 | 0 | 1 | 133 | 1025891 | 1026023 | Akkermansia muciniphila strain EB-AMDK-28 chromosome, complete genome | blastn | 12489 | 246 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 3564602 | 3564602 | PRJNA1068830_P_NODE_21023_length_519_cov_1.553812_g20322_i0 | PRJNA1068830 | 21023 | 519 | 1.553812 | 8.06428428 | Bacteria | 2 | Bacteria | Bacteria | 787 | 0 | NTclustered | gi|60266416|gb|AY921870.1| | 156588 | g20322 | i0 | 94.038 | 96.7976878612717 | 520 | 29 | 100 | 2 | 1 | 519 | 521 | 3 | Uncultured Verrucomicrobia bacterium clone AKYG386 16S ribosomal RNA gene, partial sequence | blastn | 50238 | 787 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 4008961 | 4008961 | PRJNA1068830_P_NODE_30224_length_415_cov_2.242690_g29521_i0 | PRJNA1068830 | 30224 | 415 | 2.24269 | 9.3071635 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 449 | 1.2099999999999998e-121 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g29521 | i0 | 86.473 | 99.0674698795181 | 414 | 50 | 99 | 5 | 6 | 415 | 2018222 | 2017811 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 41113 | 449 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 4009761 | 4009761 | PRJNA1068830_P_NODE_63944_length_271_cov_1.833333_g63241_i0 | PRJNA1068830 | 63944 | 271 | 1.833333 | 4.96833243 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 254 | 6.35e-63 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g63241 | i0 | 93.529 | 64.2029520295203 | 170 | 11 | 63 | 0 | 1 | 170 | 3990701 | 3990870 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 17399 | 254 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 6117332 | 6117332 | PRJNA1068830_P_NODE_41465_length_345_cov_0.797794_g40762_i0 | PRJNA1068830 | 41465 | 345 | 0.797794 | 2.7523893 | Gemmata | 113 | Bacteria | Bacteria | 459 | 1.65e-124 | NTclustered | gi|12583965|gb|AF245369.1|AF245369 | 114 | g40762 | i0 | 90.778 | 141.214492753623 | 347 | 26 | 100 | 5 | 1 | 345 | 1916 | 1574 | Gemmata obscuriglobus 23S ribosomal RNA gene, partial sequence | blastn | 48719 | 459 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 7835474 | 7835474 | PRJNA1068830_P_NODE_50147_length_309_cov_1.983051_g49444_i0 | PRJNA1068830 | 50147 | 309 | 1.983051 | 6.12762759 | Methylacidimicrobium sp. B4 | 2796139 | Bacteria | Bacteria | 370 | 7.01e-98 | NTclustered | gi|1999103383|gb|CP066203.1| | 2796139 | g49444 | i0 | 88.525 | 7.03883495145631 | 305 | 35 | 99 | 0 | 1 | 305 | 125508 | 125812 | Methylacidimicrobium sp. B4 chromosome, complete genome | blastn | 2175 | 370 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidimicrobium | Methylacidimicrobium sp. B4 | ||||
| 8667459 | 8667459 | PRJNA1068830_P_NODE_59287_length_283_cov_0.928571_g58584_i0 | PRJNA1068830 | 59287 | 283 | 0.928571 | 2.62785593 | Akkermansia | 239934 | Bacteria | Bacteria | 507 | 4.64e-139 | NTclustered | gi|1805960388|gb|CP029703.1| | 239935 | g58584 | i0 | 98.94 | 94.9540636042403 | 283 | 3 | 100 | 0 | 1 | 283 | 2393422 | 2393140 | Akkermansia muciniphila strain EB-AMDK-46 chromosome, complete genome | blastn | 26872 | 507 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 9111187 | 9111187 | PRJNA1068830_P_NODE_7648_length_927_cov_2.555035_g7077_i0 | PRJNA1068830 | 7648 | 927 | 2.555035 | 23.68517445 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 1061 | 0 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g7077 | i0 | 87.42 | 196.663430420712 | 938 | 99 | 100 | 18 | 1 | 927 | 1639 | 710 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 182307 | 1061 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 10386394 | 10386394 | PRJNA1068830_P_NODE_57449_length_287_cov_1.457944_g56746_i0 | PRJNA1068830 | 57449 | 287 | 1.457944 | 4.18429928 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 252 | 2.44e-62 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g56746 | i0 | 83.158 | 166.933797909408 | 285 | 39 | 99 | 6 | 1 | 284 | 2362615 | 2362891 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 47910 | 252 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 10387112 | 10387112 | PRJNA1068830_P_NODE_85269_length_244_cov_0.912281_g84566_i0 | PRJNA1068830 | 85269 | 244 | 0.912281 | 2.22596564 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 351 | 1.9399999999999998e-92 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g84566 | i0 | 93.724 | 26.8729508196721 | 239 | 8 | 95 | 2 | 1 | 232 | 1849227 | 1849465 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 6557 | 351 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 15486570 | 15486570 | PRJNA1068830_P_NODE_87153_length_243_cov_0.917647_g86450_i0 | PRJNA1068830 | 87153 | 243 | 0.917647 | 2.22988221 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 444 | 3.09e-120 | NTclustered | gi|1805960388|gb|CP029703.1| | 239935 | g86450 | i0 | 99.588 | 95.4444444444444 | 243 | 1 | 100 | 0 | 1 | 243 | 1490564 | 1490322 | Akkermansia muciniphila strain EB-AMDK-46 chromosome, complete genome | blastn | 23193 | 444 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 16760578 | 16760578 | PRJNA1068830_P_NODE_78634_length_249_cov_0.886364_g77931_i0 | PRJNA1068830 | 78634 | 249 | 0.886364 | 2.20704636 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 455 | 1.47e-123 | NTclustered | gi|2623923984|gb|CP115935.1| | 239935 | g77931 | i0 | 99.598 | 14 | 249 | 1 | 100 | 0 | 1 | 249 | 156275 | 156027 | Akkermansia muciniphila strain SDLYAKK8 chromosome, complete genome | blastn | 3486 | 455 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 20584032 | 20584032 | PRJNA1068830_P_NODE_49657_length_311_cov_1.457983_g48954_i0 | PRJNA1068830 | 49657 | 311 | 1.457983 | 4.53432713 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 575 | 1.3899999999999995e-159 | NTclustered | gi|2051353120|gb|CP072035.1| | 239935 | g48954 | i0 | 100 | 38.411575562701 | 311 | 0 | 100 | 0 | 1 | 311 | 2448027 | 2448337 | Akkermansia muciniphila strain Akk1576 chromosome, complete genome | blastn | 11946 | 575 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 20584695 | 20584695 | PRJNA1068830_P_NODE_77057_length_250_cov_0.881356_g76354_i0 | PRJNA1068830 | 77057 | 250 | 0.881356 | 2.20339 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1805960388|gb|CP029703.1| | 239935 | g76354 | i0 | 100 | 100 | 250 | 0 | 100 | 0 | 1 | 250 | 1338137 | 1338386 | Akkermansia muciniphila strain EB-AMDK-46 chromosome, complete genome | blastn | 25000 | 462 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 20584806 | 20584806 | PRJNA1068830_P_NODE_81397_length_247_cov_0.896552_g80694_i0 | PRJNA1068830 | 81397 | 247 | 0.896552 | 2.21448344 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 407 | 4.14e-109 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g80694 | i0 | 96.356 | 40.82995951417 | 247 | 9 | 100 | 0 | 1 | 247 | 1850486 | 1850732 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 10085 | 407 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 23135882 | 23135882 | PRJNA1068830_P_NODE_74059_length_252_cov_0.871508_g73356_i0 | PRJNA1068830 | 74059 | 252 | 0.871508 | 2.19620016 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|1510315172|gb|CP024736.1| | 239935 | g73356 | i0 | 100 | 99.9880952380952 | 252 | 0 | 100 | 0 | 1 | 252 | 1509647 | 1509898 | Akkermansia muciniphila strain EB-AMDK-1 chromosome, complete genome | blastn | 25197 | 466 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 23966715 | 23966715 | PRJNA1068830_P_NODE_71919_length_253_cov_2.094444_g71216_i0 | PRJNA1068830 | 71919 | 253 | 2.094444 | 5.29894332 | Akkermansia | 239934 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|1805960388|gb|CP029703.1| | 239935 | g71216 | i0 | 100 | 94.9604743083004 | 253 | 0 | 100 | 0 | 1 | 253 | 1768351 | 1768099 | Akkermansia muciniphila strain EB-AMDK-46 chromosome, complete genome | blastn | 24025 | 468 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 24409602 | 24409602 | PRJNA1068830_P_NODE_78120_length_249_cov_0.886364_g77417_i0 | PRJNA1068830 | 78120 | 249 | 0.886364 | 2.20704636 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 453 | 5.29e-123 | NTclustered | gi|2623923984|gb|CP115935.1| | 239935 | g77417 | i0 | 99.598 | 8.36144578313253 | 249 | 0 | 100 | 1 | 1 | 249 | 176065 | 175818 | Akkermansia muciniphila strain SDLYAKK8 chromosome, complete genome | blastn | 2082 | 453 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;