contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA1068830" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 183307 | 183307 | PRJNA1068830_P_NODE_6281_length_1032_cov_3.029197_g5771_i0 | PRJNA1068830 | 6281 | 1032 | 3.029197 | 31.26131304 | Leptolyngbya sp. 7M | 2812896 | Bacteria | Bacteria | 1585 | 0 | NTclustered | gi|2028908486|gb|CP070897.1| | 2812896 | g5771 | i0 | 94.466 | 180.226744186047 | 1030 | 56 | 99 | 1 | 2 | 1030 | 2056131 | 2055102 | Leptolyngbya sp. 7M chromosome | blastn | 185994 | 1585 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Leptolyngbyales | Leptolyngbyaceae | Leptolyngbya | Leptolyngbya sp. 7M | |
| 183389 | 183389 | PRJNA1068830_P_NODE_66561_length_265_cov_1.625000_g65858_i0 | PRJNA1068830 | 66561 | 265 | 1.625 | 4.30625 | Chroococcidiopsis sp. SAG 2025 | 171389 | Bacteria | Bacteria | 462 | 9.44e-126 | NTclustered | gi|146740648|emb|AM709635.1| | 171389 | g65858 | i0 | 98.12 | 125.041509433962 | 266 | 4 | 100 | 1 | 1 | 265 | 1945 | 2210 | Chroococcidiopsis sp. SAG 2025 partial ribosomal RNA operon, strain SAG 2025 | blastn | 33136 | 462 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | Chroococcidiopsis sp. SAG 2025 | |
| 1014200 | 1014200 | PRJNA1068830_P_NODE_47261_length_319_cov_2.886179_g46558_i0 | PRJNA1068830 | 47261 | 319 | 2.886179 | 9.20691101 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 510 | 4.11e-140 | NTclustered | gi|745734113|gb|KM458377.1| | 156210 | g46558 | i0 | 95.597 | 98.7931034482759 | 318 | 14 | 99 | 0 | 2 | 319 | 375 | 58 | Uncultured Oscillatoriales cyanobacterium isolate OTU 00121 23S ribosomal RNA gene, partial sequence | blastn | 31515 | 512 | 0.99609375 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | uncultured Oscillatoriales cyanobacterium | |||
| 8667340 | 8667340 | PRJNA1068830_P_NODE_37607_length_365_cov_1.386986_g36904_i0 | PRJNA1068830 | 37607 | 365 | 1.386986 | 5.0624989 | Chroococcidiopsis | 54298 | Bacteria | Bacteria | 662 | 0 | NTclustered | gi|428006994|gb|CP003597.1| | 251229 | g36904 | i0 | 99.451 | 74.5342465753425 | 364 | 2 | 99 | 0 | 1 | 364 | 4858100 | 4857737 | Chroococcidiopsis thermalis PCC 7203, complete genome | blastn | 27205 | 662 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | Chroococcidiopsis thermalis | |
| 9111308 | 9111308 | PRJNA1068830_P_NODE_80808_length_247_cov_0.896552_g80105_i0 | PRJNA1068830 | 80808 | 247 | 0.896552 | 2.21448344 | Nostoc sp. UHCC 0702 | 2814655 | Bacteria | Bacteria | 76.8 | 1.32e-9 | NTclustered | gi|1996588181|gb|CP071065.1| | 2814655 | g80105 | i0 | 89.831 | 0.748987854251012 | 59 | 6 | 24 | 0 | 96 | 154 | 7461951 | 7461893 | Nostoc sp. UHCC 0702 chromosome, complete genome | blastn | 185 | 76.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc sp. UHCC 0702 | |
| 11661671 | 11661671 | PRJNA1068830_P_NODE_55550_length_292_cov_1.415525_g54847_i0 | PRJNA1068830 | 55550 | 292 | 1.415525 | 4.133333 | Prochlorococcus sp. MIT 1341 | 3096221 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|2625929777|gb|CP139304.1| | 3096221 | g54847 | i0 | 100 | 0.0993150684931507 | 29 | 0 | 10 | 0 | 263 | 291 | 683486 | 683458 | Prochlorococcus sp. MIT 1341 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Prochlorococcaceae | Prochlorococcus | Prochlorococcus sp. MIT 1341 | |
| 12493013 | 12493013 | PRJNA1068830_P_NODE_34210_length_386_cov_1.325879_g33507_i0 | PRJNA1068830 | 34210 | 386 | 1.325879 | 5.11789294 | Chroococcidiopsis | 54298 | Bacteria | Bacteria | 647 | 0 | NTclustered | gi|146740648|emb|AM709635.1| | 171389 | g33507 | i0 | 96.891 | 115.046632124352 | 386 | 12 | 100 | 0 | 1 | 386 | 3060 | 2675 | Chroococcidiopsis sp. SAG 2025 partial ribosomal RNA operon, strain SAG 2025 | blastn | 44408 | 652 | 0.992331288343558 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | Chroococcidiopsis sp. SAG 2025 | |
| 12493248 | 12493248 | PRJNA1068830_P_NODE_81730_length_246_cov_2.057803_g81027_i0 | PRJNA1068830 | 81730 | 246 | 2.057803 | 5.06219538 | Microcoleus | 44471 | Bacteria | Bacteria | 449 | 6.74e-122 | NTclustered | gi|521763684|gb|KC463552.1| | 1211 | g81027 | i0 | 99.593 | 99.5772357723577 | 246 | 1 | 100 | 0 | 1 | 246 | 644 | 399 | Uncultured cyanobacterium clone BksYy29400 16S ribosomal RNA gene, partial sequence | blastn | 24496 | 449 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium | |||||
| 19309114 | 19309114 | PRJNA1068830_P_NODE_72896_length_253_cov_0.866667_g72193_i0 | PRJNA1068830 | 72896 | 253 | 0.866667 | 2.19266751 | Nostoc sp. ATCC 53789 | 76335 | Bacteria | Bacteria | 134 | 7.970000000000001e-27 | NTclustered | gi|1796915307|gb|CP046705.1| | 76335 | g72193 | i0 | 76.953 | 1.01185770750988 | 256 | 45 | 97 | 7 | 9 | 253 | 301322 | 301574 | Nostoc sp. ATCC 53789 plasmid pNsp_b, complete sequence | blastn | 256 | 134 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc sp. ATCC 53789 | |
| 21416285 | 21416285 | PRJNA1068830_P_NODE_62537_length_275_cov_1.158416_g61834_i0 | PRJNA1068830 | 62537 | 275 | 1.158416 | 3.185644 | Chroococcidiopsis | 54298 | Bacteria | Bacteria | 501 | 2.0899999999999996e-137 | NTclustered | gi|146740648|emb|AM709635.1| | 171389 | g61834 | i0 | 99.635 | 142.650909090909 | 274 | 1 | 99 | 0 | 2 | 275 | 3253 | 2980 | Chroococcidiopsis sp. SAG 2025 partial ribosomal RNA operon, strain SAG 2025 | blastn | 39229 | 501 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | Chroococcidiopsis sp. SAG 2025 | |
| 21860486 | 21860486 | PRJNA1068830_P_NODE_78438_length_249_cov_0.886364_g77735_i0 | PRJNA1068830 | 78438 | 249 | 0.886364 | 2.20704636 | Trichotorquatus maritimus | 2815550 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1373417989|gb|KY511273.1| | 2136406 | g77735 | i0 | 100 | 168.277108433735 | 249 | 0 | 100 | 0 | 1 | 249 | 30 | 278 | Trichotorquatus maritimus SMER-A clone 2 23S ribosomal RNA gene, partial sequence; 23S-5S intergenic spacer, complete sequence; and 5S ribosomal RNA gene, partial sequence | blastn | 41901 | 460 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oculatellales | Oculatellaceae | Trichotorquatus | Trichotorquatus maritimus | |
| 23966535 | 23966535 | PRJNA1068830_P_NODE_38619_length_359_cov_2.209790_g37916_i0 | PRJNA1068830 | 38619 | 359 | 2.20979 | 7.9331461 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 466 | 1.0199999999999999e-126 | NTclustered | gi|984535223|dbj|AP017367.1| | 1080068 | g37916 | i0 | 90.598 | 155.66852367688 | 351 | 33 | 98 | 0 | 2 | 352 | 281642 | 281992 | Leptolyngbya sp. O-77 DNA, complete genome | blastn | 55885 | 468 | 0.995726495726496 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Leptolyngbyales | Leptolyngbyaceae | Leptolyngbya | Leptolyngbya sp. O-77 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;