contig_metadata
183 rows where analysis = "blastn", bioproject = "PRJNA1068513" and tax_phylum = "Pisuviricota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 181867 | 181867 | PRJNA1068513_S_NODE_11261_length_264_cov_0.879581_g11215_i0 | PRJNA1068513 | 11261 | 264 | 0.879581 | 2.32209384 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 84.2 | 8.55e-12 | NTclustered | gi|2565353280|emb|OY626164.1| | 2697049 | g11215 | i0 | 96.078 | 18.905303030303 | 51 | 2 | 19 | 0 | 213 | 263 | 26508 | 26558 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4991 | 84.2 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 181902 | 181902 | PRJNA1068513_S_NODE_181_length_1094_cov_34.350637_g161_i0 | PRJNA1068513 | 181 | 1094 | 34.350637 | 375.79596878 | Nepovirus arabis | 3047374 | Viruses | Viruses | 60.2 | 6.65e-4 | NTclustered | gi|2167415105|tpg|BK059322.1| | 12271 | g161 | i0 | 97.143 | 5.9890310786106 | 35 | 1 | 6 | 0 | 1 | 35 | 10 | 44 | TPA_asm: Arabis mosaic virus isolate SRR5788585_ArMV segment RNA1, complete sequence | blastn | 6552 | 60.2 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Secoviridae | Nepovirus | Nepovirus arabis | ||
| 181940 | 181940 | PRJNA1068513_S_NODE_4141_length_441_cov_2.154891_g4096_i0 | PRJNA1068513 | 4141 | 441 | 2.154891 | 9.50306931 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 126 | 2.48e-24 | NTclustered | gi|2165835005|emb|OV196273.1| | 2697049 | g4096 | i0 | 97.333 | 18.3764172335601 | 75 | 0 | 17 | 2 | 40 | 113 | 38 | 111 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8104 | 126 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 181950 | 181950 | PRJNA1068513_S_NODE_4621_length_420_cov_10.432277_g4576_i0 | PRJNA1068513 | 4621 | 420 | 10.432277 | 43.8155634 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 69.4 | 4.01e-7 | NTclustered | gi|2557654279|emb|OY684629.1| | 2697049 | g4576 | i0 | 95.349 | 8.48571428571429 | 43 | 2 | 10 | 0 | 378 | 420 | 26110 | 26152 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3564 | 69.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 181958 | 181958 | PRJNA1068513_S_NODE_5521_length_387_cov_2.305732_g5475_i0 | PRJNA1068513 | 5521 | 387 | 2.305732 | 8.92318284 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 119 | 3.59e-22 | NTclustered | gi|2165809375|emb|OV264044.1| | 2697049 | g5475 | i0 | 95.946 | 21.1059431524548 | 74 | 1 | 19 | 2 | 35 | 106 | 131 | 204 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8168 | 119 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 181971 | 181971 | PRJNA1068513_S_NODE_6481_length_359_cov_1.038462_g6435_i0 | PRJNA1068513 | 6481 | 359 | 1.038462 | 3.72807858 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 71.3 | 9.39e-8 | NTclustered | gi|2165836883|emb|OV197187.1| | 2697049 | g6435 | i0 | 87.273 | 10.8189415041783 | 55 | 7 | 15 | 0 | 305 | 359 | 155 | 101 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 3884 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 181973 | 181973 | PRJNA1068513_S_NODE_6681_length_353_cov_4.332143_g6635_i0 | PRJNA1068513 | 6681 | 353 | 4.332143 | 15.29246479 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 69.4 | 3.31e-7 | NTclustered | gi|2557653524|emb|OY683806.1| | 2697049 | g6635 | i0 | 93.478 | 10.9631728045326 | 46 | 3 | 13 | 0 | 1 | 46 | 10444 | 10399 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3870 | 69.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 181982 | 181982 | PRJNA1068513_S_NODE_7421_length_334_cov_2.957854_g7375_i0 | PRJNA1068513 | 7421 | 334 | 2.957854 | 9.87923236 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 75 | 6.72e-9 | NTclustered | gi|2560516847|emb|OY702104.1| | 2697049 | g7375 | i0 | 100 | 13.0149700598802 | 40 | 0 | 12 | 0 | 10 | 49 | 23323 | 23284 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4347 | 75 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 181997 | 181997 | PRJNA1068513_S_NODE_8841_length_304_cov_2.134199_g8795_i0 | PRJNA1068513 | 8841 | 304 | 2.134199 | 6.48796496 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 71.3 | 7.82e-8 | NTclustered | gi|2557389902|emb|OY653400.1| | 2697049 | g8795 | i0 | 100 | 13.4802631578947 | 38 | 0 | 13 | 0 | 261 | 298 | 19650 | 19687 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4098 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 182004 | 182004 | PRJNA1068513_S_NODE_9641_length_289_cov_2.583333_g9595_i0 | PRJNA1068513 | 9641 | 289 | 2.583333 | 7.46583237 | Nepovirus arabis | 3047374 | Viruses | Viruses | 62.1 | 4.44e-5 | NTclustered | gi|2167415105|tpg|BK059322.1| | 12271 | g9595 | i0 | 97.222 | 0.318339100346021 | 36 | 1 | 12 | 0 | 10 | 45 | 8 | 43 | TPA_asm: Arabis mosaic virus isolate SRR5788585_ArMV segment RNA1, complete sequence | blastn | 92 | 62.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Secoviridae | Nepovirus | Nepovirus arabis | ||
| 1013625 | 1013625 | PRJNA1068513_S_NODE_1421_length_626_cov_18.376130_g1380_i0 | PRJNA1068513 | 1421 | 626 | 18.37613 | 115.0345738 | Orthornavirae | 2732396 | Viruses | Viruses | 56.5 | 0.005 | NTclustered | gi|2155043487|emb|OV016108.1| | 2697049 | g1380 | i0 | 97.059 | 1.80990415335463 | 34 | 0 | 5 | 1 | 1 | 34 | 29913 | 29945 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 1133 | 56.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 1013643 | 1013643 | PRJNA1068513_S_NODE_8921_length_303_cov_1.460870_g8875_i0 | PRJNA1068513 | 8921 | 303 | 1.46087 | 4.4264361 | Viruses | 10239 | Viruses | Viruses | 67.6 | 1.01e-6 | NTclustered | gi|2557646044|emb|OY675404.1| | 2697049 | g8875 | i0 | 100 | 13.2013201320132 | 36 | 0 | 12 | 0 | 5 | 40 | 18477 | 18442 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4000 | 67.6 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 1456513 | 1456513 | PRJNA1068513_S_NODE_1502_length_616_cov_82.662983_g1461_i0 | PRJNA1068513 | 1502 | 616 | 82.662983 | 509.20397528 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 108 | 1.29e-18 | NTclustered | gi|2165834303|emb|OV196009.1| | 2697049 | g1461 | i0 | 93.151 | 12.4772727272727 | 73 | 5 | 12 | 0 | 1 | 73 | 43 | 115 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7686 | 108 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 1456531 | 1456531 | PRJNA1068513_S_NODE_2282_length_546_cov_4.634249_g2240_i0 | PRJNA1068513 | 2282 | 546 | 4.634249 | 25.30299954 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 135 | 5.1800000000000005e-27 | NTclustered | gi|2165834316|emb|OV196022.1| | 2697049 | g2240 | i0 | 94.318 | 18.456043956044 | 88 | 5 | 16 | 0 | 57 | 144 | 502 | 589 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 10077 | 135 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 1456538 | 1456538 | PRJNA1068513_S_NODE_2782_length_511_cov_3.363014_g2738_i0 | PRJNA1068513 | 2782 | 511 | 3.363014 | 17.18500154 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 126 | 2.91e-24 | NTclustered | gi|2165834303|emb|OV196009.1| | 2697049 | g2738 | i0 | 96.104 | 16.3444227005871 | 77 | 3 | 15 | 0 | 406 | 482 | 116 | 40 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8352 | 126 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 1456550 | 1456550 | PRJNA1068513_S_NODE_3422_length_475_cov_2.537313_g3377_i0 | PRJNA1068513 | 3422 | 475 | 2.537313 | 12.05223675 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 119 | 4.49e-22 | NTclustered | gi|2165835007|emb|OV196275.1| | 2697049 | g3377 | i0 | 95.89 | 17.0210526315789 | 73 | 3 | 15 | 0 | 1 | 73 | 123 | 195 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8085 | 119 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 1456552 | 1456552 | PRJNA1068513_S_NODE_3502_length_471_cov_1.301508_g3457_i0 | PRJNA1068513 | 3502 | 471 | 1.301508 | 6.13010268 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 76.8 | 2.72e-9 | NTclustered | gi|2557648311|emb|OY677105.1| | 2697049 | g3457 | i0 | 97.727 | 9.4140127388535 | 44 | 1 | 9 | 0 | 415 | 458 | 9634 | 9677 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4434 | 76.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 1456555 | 1456555 | PRJNA1068513_S_NODE_3582_length_467_cov_4.246193_g3537_i0 | PRJNA1068513 | 3582 | 467 | 4.246193 | 19.82972131 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 99 | 5.75e-16 | NTclustered | gi|2165835007|emb|OV196275.1| | 2697049 | g3537 | i0 | 92.754 | 11.9122055674518 | 69 | 3 | 15 | 2 | 400 | 467 | 195 | 128 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 5563 | 99 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 1456571 | 1456571 | PRJNA1068513_S_NODE_4542_length_423_cov_4.260000_g4497_i0 | PRJNA1068513 | 4542 | 423 | 4.26 | 18.0198 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 73.1 | 3.13e-8 | NTclustered | gi|2560516847|emb|OY702104.1| | 2697049 | g4497 | i0 | 100 | 9.64775413711584 | 39 | 0 | 9 | 0 | 378 | 416 | 23280 | 23318 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4081 | 73.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 2288875 | 2288875 | PRJNA1068513_S_NODE_13162_length_243_cov_2.835294_g13116_i0 | PRJNA1068513 | 13162 | 243 | 2.835294 | 6.88976442 | Viruses | 10239 | Viruses | Viruses | 71.3 | 6.05e-8 | NTclustered | gi|2557646044|emb|OY675404.1| | 2697049 | g13116 | i0 | 93.617 | 17.5185185185185 | 47 | 3 | 19 | 0 | 197 | 243 | 18442 | 18488 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4257 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 2288888 | 2288888 | PRJNA1068513_S_NODE_7042_length_344_cov_1.929889_g6996_i0 | PRJNA1068513 | 7042 | 344 | 1.929889 | 6.63881816 | Viruses | 10239 | Viruses | Viruses | 86.1 | 3.21e-12 | NTclustered | gi|2557654415|emb|OY684664.1| | 2697049 | g6996 | i0 | 94.545 | 17.4186046511628 | 55 | 3 | 16 | 0 | 1 | 55 | 21988 | 21934 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 5992 | 86.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 2732351 | 2732351 | PRJNA1068513_S_NODE_1083_length_678_cov_1.429752_g1044_i0 | PRJNA1068513 | 1083 | 678 | 1.429752 | 9.69371856 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 134 | 2.35e-26 | NTclustered | gi|2165809375|emb|OV264044.1| | 2697049 | g1044 | i0 | 85.827 | 12.7536873156342 | 127 | 16 | 18 | 2 | 17 | 141 | 78 | 204 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8647 | 134 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 2732360 | 2732360 | PRJNA1068513_S_NODE_1203_length_656_cov_11.456261_g1163_i0 | PRJNA1068513 | 1203 | 656 | 11.456261 | 75.15307216 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 71.3 | 1.8e-7 | NTclustered | gi|2560516847|emb|OY702104.1| | 2697049 | g1163 | i0 | 100 | 6.05640243902439 | 38 | 0 | 6 | 0 | 616 | 653 | 23286 | 23323 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3973 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 2732377 | 2732377 | PRJNA1068513_S_NODE_13863_length_226_cov_9.869281_g13817_i0 | PRJNA1068513 | 13863 | 226 | 9.869281 | 22.30457506 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 63.9 | 9.29e-6 | NTclustered | gi|2155043487|emb|OV016108.1| | 2697049 | g13817 | i0 | 95 | 16.5221238938053 | 40 | 2 | 18 | 0 | 1 | 40 | 29911 | 29950 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 3734 | 63.9 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 2732421 | 2732421 | PRJNA1068513_S_NODE_443_length_855_cov_7.387468_g416_i0 | PRJNA1068513 | 443 | 855 | 7.387468 | 63.1628514 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 82.4 | 1.1e-10 | NTclustered | gi|2165834218|emb|OV195924.1| | 2697049 | g416 | i0 | 94.444 | 6.04678362573099 | 54 | 2 | 6 | 1 | 802 | 855 | 355 | 303 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 5170 | 82.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 3564165 | 3564165 | PRJNA1068513_S_NODE_8223_length_316_cov_1.399177_g8177_i0 | PRJNA1068513 | 8223 | 316 | 1.399177 | 4.42139932 | Viruses | 10239 | Viruses | Viruses | 84.2 | 1.05e-11 | NTclustered | gi|2165832605|emb|OV195107.1| | 2697049 | g8177 | i0 | 92.982 | 21.7943037974684 | 57 | 4 | 19 | 0 | 260 | 316 | 116 | 60 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 6887 | 84.2 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4008278 | 4008278 | PRJNA1068513_S_NODE_1024_length_690_cov_3.252836_g985_i0 | PRJNA1068513 | 1024 | 690 | 3.252836 | 22.4445684 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 76.8 | 4.09e-9 | NTclustered | gi|2165834194|emb|OV195900.1| | 2697049 | g985 | i0 | 92.453 | 13.9507246376812 | 53 | 4 | 15 | 0 | 1 | 53 | 146 | 198 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 9626 | 76.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4008285 | 4008285 | PRJNA1068513_S_NODE_10844_length_270_cov_2.131980_g10798_i0 | PRJNA1068513 | 10844 | 270 | 2.13198 | 5.756346 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 100 | 8.71e-17 | NTclustered | gi|2165809375|emb|OV264044.1| | 2697049 | g10798 | i0 | 95.312 | 26.5074074074074 | 64 | 1 | 23 | 1 | 209 | 270 | 204 | 141 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7157 | 100 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4008293 | 4008293 | PRJNA1068513_S_NODE_12024_length_253_cov_1.277778_g11978_i0 | PRJNA1068513 | 12024 | 253 | 1.277778 | 3.23277834 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 71.3 | 6.34e-8 | NTclustered | gi|2560516847|emb|OY702104.1| | 2697049 | g11978 | i0 | 100 | 15.1818181818182 | 38 | 0 | 15 | 0 | 8 | 45 | 23323 | 23286 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3841 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4008298 | 4008298 | PRJNA1068513_S_NODE_1244_length_650_cov_4.738302_g1204_i0 | PRJNA1068513 | 1244 | 650 | 4.738302 | 30.798963 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 65.8 | 8.3e-6 | NTclustered | gi|2165836883|emb|OV197187.1| | 2697049 | g1204 | i0 | 84.906 | 6.05384615384615 | 53 | 8 | 8 | 0 | 6 | 58 | 103 | 155 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 3935 | 65.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4008320 | 4008320 | PRJNA1068513_S_NODE_1744_length_591_cov_9.971042_g1703_i0 | PRJNA1068513 | 1744 | 591 | 9.971042 | 58.92885822 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 82.4 | 7.45e-11 | NTclustered | gi|2557654546|emb|OY684713.1| | 2697049 | g1703 | i0 | 94.444 | 10.5549915397631 | 54 | 1 | 9 | 2 | 539 | 591 | 21737 | 21789 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 6238 | 82.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4008325 | 4008325 | PRJNA1068513_S_NODE_2044_length_564_cov_16.085540_g2002_i0 | PRJNA1068513 | 2044 | 564 | 16.08554 | 90.7224456 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 76.8 | 3.3e-9 | NTclustered | gi|2165835007|emb|OV196275.1| | 2697049 | g2002 | i0 | 90.164 | 7.57446808510638 | 61 | 3 | 10 | 3 | 1 | 59 | 30221 | 30280 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 4272 | 76.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4008327 | 4008327 | PRJNA1068513_S_NODE_2204_length_552_cov_8.457203_g2162_i0 | PRJNA1068513 | 2204 | 552 | 8.457203 | 46.68376056 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 71.3 | 1.5e-7 | NTclustered | gi|2557654279|emb|OY684629.1| | 2697049 | g2162 | i0 | 97.619 | 7.34601449275362 | 42 | 0 | 8 | 1 | 14 | 55 | 26156 | 26116 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4055 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4008375 | 4008375 | PRJNA1068513_S_NODE_6344_length_363_cov_1.517241_g6298_i0 | PRJNA1068513 | 6344 | 363 | 1.517241 | 5.50758483 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 115 | 4.33e-21 | NTclustered | gi|2165834294|emb|OV196000.1| | 2697049 | g6298 | i0 | 93.506 | 22.1157024793388 | 77 | 5 | 21 | 0 | 263 | 339 | 137 | 61 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8028 | 115 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4008382 | 4008382 | PRJNA1068513_S_NODE_6524_length_358_cov_1.326316_g6478_i0 | PRJNA1068513 | 6524 | 358 | 1.326316 | 4.74821128 | Sobemovirus PHYRMV | 3432500 | Viruses | Viruses | 62.1 | 5.63e-5 | NTclustered | gi|2047108924|ref|NC_055577.1| | 2607629 | g6478 | i0 | 100 | 9.82960893854749 | 33 | 0 | 9 | 0 | 326 | 358 | 36 | 4 | Physalis rugose mosaic virus isolate Piracicaba, complete genome | blastn | 3519 | 62.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Sobelivirales | Solemoviridae | Sobemovirus | Sobemovirus PHYRMV | ||
| 4008392 | 4008392 | PRJNA1068513_S_NODE_724_length_752_cov_5.643594_g688_i0 | PRJNA1068513 | 724 | 752 | 5.643594 | 42.43982688 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 69.4 | 7.49e-7 | NTclustered | gi|2560517252|emb|OY702345.1| | 2697049 | g688 | i0 | 100 | 4.96808510638298 | 37 | 0 | 5 | 0 | 3 | 39 | 26531 | 26495 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3736 | 69.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4008413 | 4008413 | PRJNA1068513_S_NODE_924_length_706_cov_2.658768_g886_i0 | PRJNA1068513 | 924 | 706 | 2.658768 | 18.77090208 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 80.5 | 3.24e-10 | NTclustered | gi|2165834670|emb|OV196177.1| | 2697049 | g886 | i0 | 95.918 | 6.52549575070821 | 49 | 2 | 7 | 0 | 1 | 49 | 68 | 116 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 4607 | 80.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4841644 | 4841644 | PRJNA1068513_S_NODE_2104_length_560_cov_5.227926_g2062_i0 | PRJNA1068513 | 2104 | 560 | 5.227926 | 29.2763856 | Orthornavirae | 2732396 | Viruses | Viruses | 71.3 | 1.52e-7 | NTclustered | gi|2165835007|emb|OV196275.1| | 2697049 | g2062 | i0 | 92.157 | 7.15892857142857 | 51 | 2 | 9 | 2 | 511 | 560 | 195 | 146 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 4009 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4841650 | 4841650 | PRJNA1068513_S_NODE_3604_length_466_cov_3.384224_g3559_i0 | PRJNA1068513 | 3604 | 466 | 3.384224 | 15.77048384 | Betacoronavirus | 694002 | Viruses | Viruses | 84.2 | 1.61e-11 | NTclustered | gi|2165834141|emb|OV195847.1| | 2697049 | g3559 | i0 | 92.982 | 13.5472103004292 | 57 | 4 | 12 | 0 | 410 | 466 | 118 | 62 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 6313 | 84.2 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 5284610 | 5284610 | PRJNA1068513_S_NODE_1125_length_670_cov_7.423786_g1085_i0 | PRJNA1068513 | 1125 | 670 | 7.423786 | 49.7393662 | Nepovirus arabis | 3047374 | Viruses | Viruses | 58.4 | 0.001 | NTclustered | gi|2167415105|tpg|BK059322.1| | 12271 | g1085 | i0 | 100 | 0.32089552238806 | 31 | 0 | 5 | 0 | 1 | 31 | 13 | 43 | TPA_asm: Arabis mosaic virus isolate SRR5788585_ArMV segment RNA1, complete sequence | blastn | 215 | 58.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Secoviridae | Nepovirus | Nepovirus arabis | ||
| 5284614 | 5284614 | PRJNA1068513_S_NODE_11845_length_255_cov_1.461538_g11799_i0 | PRJNA1068513 | 11845 | 255 | 1.461538 | 3.7269219 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 80.5 | 1.06e-10 | NTclustered | gi|2565352131|emb|OY625234.1| | 2697049 | g11799 | i0 | 95.918 | 20.3529411764706 | 49 | 2 | 19 | 0 | 1 | 49 | 23735 | 23687 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 5190 | 80.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 5284628 | 5284628 | PRJNA1068513_S_NODE_13205_length_243_cov_1.376471_g13159_i0 | PRJNA1068513 | 13205 | 243 | 1.376471 | 3.34482453 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 82.4 | 2.79e-11 | NTclustered | gi|2565353280|emb|OY626164.1| | 2697049 | g13159 | i0 | 96 | 20.5720164609053 | 50 | 2 | 21 | 0 | 2 | 51 | 26558 | 26509 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4999 | 82.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 5284656 | 5284656 | PRJNA1068513_S_NODE_265_length_973_cov_50.513333_g243_i0 | PRJNA1068513 | 265 | 973 | 50.513333 | 491.49473009 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 87.9 | 2.7e-12 | NTclustered | gi|2165834218|emb|OV195924.1| | 2697049 | g243 | i0 | 96.226 | 13.2497430626927 | 53 | 2 | 11 | 0 | 1 | 53 | 299 | 351 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 12892 | 87.9 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 5284712 | 5284712 | PRJNA1068513_S_NODE_625_length_776_cov_19.102418_g592_i0 | PRJNA1068513 | 625 | 776 | 19.102418 | 148.23476368 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 87.9 | 2.13e-12 | NTclustered | gi|2565352131|emb|OY625234.1| | 2697049 | g592 | i0 | 94.643 | 8.05927835051546 | 56 | 3 | 7 | 0 | 720 | 775 | 23683 | 23738 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 6254 | 87.9 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 5284751 | 5284751 | PRJNA1068513_S_NODE_925_length_705_cov_294.226266_g887_i0 | PRJNA1068513 | 925 | 705 | 294.226266 | 2074.2951753 | Nepovirus arabis | 3047374 | Viruses | Viruses | 65.8 | 9.05e-6 | NTclustered | gi|2167415105|tpg|BK059322.1| | 12271 | g887 | i0 | 100 | 5.25390070921986 | 35 | 0 | 5 | 0 | 670 | 704 | 42 | 8 | TPA_asm: Arabis mosaic virus isolate SRR5788585_ArMV segment RNA1, complete sequence | blastn | 3704 | 65.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Secoviridae | Nepovirus | Nepovirus arabis | ||
| 5284753 | 5284753 | PRJNA1068513_S_NODE_945_length_703_cov_9.188889_g906_i0 | PRJNA1068513 | 945 | 703 | 9.188889 | 64.59788967 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 117 | 2.4600000000000003e-21 | NTclustered | gi|2165835005|emb|OV196273.1| | 2697049 | g906 | i0 | 95.833 | 11.9217638691323 | 72 | 3 | 10 | 0 | 78 | 149 | 112 | 41 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8381 | 117 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6116789 | 6116789 | PRJNA1068513_S_NODE_3145_length_490_cov_2.040767_g3100_i0 | PRJNA1068513 | 3145 | 490 | 2.040767 | 9.9997583 | Viruses | 10239 | Viruses | Viruses | 93.5 | 2.82e-14 | NTclustered | gi|2165832605|emb|OV195107.1| | 2697049 | g3100 | i0 | 94.915 | 14.5714285714286 | 59 | 3 | 12 | 0 | 1 | 59 | 58 | 116 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7140 | 93.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6559703 | 6559703 | PRJNA1068513_S_NODE_1046_length_685_cov_3.890523_g1007_i0 | PRJNA1068513 | 1046 | 685 | 3.890523 | 26.65008255 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 117 | 2.39e-21 | NTclustered | gi|2165834303|emb|OV196009.1| | 2697049 | g1007 | i0 | 95.833 | 11.6058394160584 | 72 | 3 | 11 | 0 | 2 | 73 | 43 | 114 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7950 | 117 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6559758 | 6559758 | PRJNA1068513_S_NODE_3366_length_478_cov_2.274074_g3321_i0 | PRJNA1068513 | 3366 | 478 | 2.274074 | 10.87007372 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 108 | 9.79e-19 | NTclustered | gi|2165835007|emb|OV196275.1| | 2697049 | g3321 | i0 | 94.444 | 18.2071129707113 | 72 | 1 | 15 | 3 | 15 | 84 | 125 | 195 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8703 | 108 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6559769 | 6559769 | PRJNA1068513_S_NODE_4246_length_436_cov_4.220386_g4201_i0 | PRJNA1068513 | 4246 | 436 | 4.220386 | 18.40088296 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 69.4 | 4.18e-7 | NTclustered | gi|2557389902|emb|OY653400.1| | 2697049 | g4201 | i0 | 100 | 9.31880733944954 | 37 | 0 | 8 | 0 | 1 | 37 | 19686 | 19650 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4063 | 69.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6559775 | 6559775 | PRJNA1068513_S_NODE_4706_length_417_cov_3.412791_g4661_i0 | PRJNA1068513 | 4706 | 417 | 3.412791 | 14.23133847 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 113 | 1.81e-20 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g4661 | i0 | 94.595 | 40.2637889688249 | 74 | 2 | 35 | 2 | 3 | 75 | 150 | 222 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 16790 | 113 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6559784 | 6559784 | PRJNA1068513_S_NODE_5506_length_387_cov_19.414013_g5460_i0 | PRJNA1068513 | 5506 | 387 | 19.414013 | 75.13223031 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 76.8 | 2.19e-9 | NTclustered | gi|2565365187|emb|OY637518.1| | 2697049 | g5460 | i0 | 95.745 | 11.1007751937984 | 47 | 2 | 12 | 0 | 341 | 387 | 11638 | 11684 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4296 | 76.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6559808 | 6559808 | PRJNA1068513_S_NODE_7646_length_328_cov_53.843137_g7600_i0 | PRJNA1068513 | 7646 | 328 | 53.843137 | 176.60548936 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 78.7 | 5.09e-10 | NTclustered | gi|2557646044|emb|OY675404.1| | 2697049 | g7600 | i0 | 94.118 | 15.219512195122 | 51 | 3 | 16 | 0 | 1 | 51 | 18492 | 18442 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4992 | 78.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6559820 | 6559820 | PRJNA1068513_S_NODE_8486_length_310_cov_6.232068_g8440_i0 | PRJNA1068513 | 8486 | 310 | 6.232068 | 19.3194108 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 73.1 | 2.22e-8 | NTclustered | gi|2557654279|emb|OY684629.1| | 2697049 | g8440 | i0 | 95.556 | 13.9516129032258 | 45 | 2 | 15 | 0 | 4 | 48 | 26154 | 26110 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4325 | 73.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6559838 | 6559838 | PRJNA1068513_S_NODE_9786_length_287_cov_1.257009_g9740_i0 | PRJNA1068513 | 9786 | 287 | 1.257009 | 3.60761583 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 69.4 | 2.64e-7 | NTclustered | gi|2565360070|emb|OY632882.1| | 2697049 | g9740 | i0 | 100 | 13.6585365853659 | 37 | 0 | 13 | 0 | 1 | 37 | 22503 | 22467 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3920 | 69.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7391311 | 7391311 | PRJNA1068513_S_NODE_2566_length_526_cov_5.189845_g2522_i0 | PRJNA1068513 | 2566 | 526 | 5.189845 | 27.2985847 | Viruses | 10239 | Viruses | Viruses | 117 | 1.8e-21 | NTclustered | gi|2165832605|emb|OV195107.1| | 2697049 | g2522 | i0 | 95.833 | 15.3574144486692 | 72 | 3 | 14 | 0 | 45 | 116 | 45 | 116 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8078 | 117 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7391316 | 7391316 | PRJNA1068513_S_NODE_3286_length_483_cov_2.663415_g3241_i0 | PRJNA1068513 | 3286 | 483 | 2.663415 | 12.86429445 | root | 1 | Root_unresolved | Root_unresolved | 58.4 | 0.001 | NTclustered | gi|2167415105|tpg|BK059322.1| | 12271 | g3241 | i0 | 97.059 | 6.96894409937888 | 34 | 1 | 7 | 0 | 438 | 471 | 44 | 11 | TPA_asm: Arabis mosaic virus isolate SRR5788585_ArMV segment RNA1, complete sequence | blastn | 3366 | 58.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Secoviridae | Nepovirus | Nepovirus arabis | ||
| 7834333 | 7834333 | PRJNA1068513_S_NODE_1047_length_684_cov_63.659574_g1008_i0 | PRJNA1068513 | 1047 | 684 | 63.659574 | 435.43148616 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 119 | 6.63e-22 | NTclustered | gi|2165835005|emb|OV196273.1| | 2697049 | g1008 | i0 | 97.183 | 23.0730994152047 | 71 | 0 | 20 | 2 | 1 | 70 | 44 | 113 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 15782 | 119 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7834338 | 7834338 | PRJNA1068513_S_NODE_1127_length_670_cov_3.693467_g1087_i0 | PRJNA1068513 | 1127 | 670 | 3.693467 | 24.7462289 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 82.4 | 8.51e-11 | NTclustered | gi|2560522426|emb|OY698221.1| | 2697049 | g1087 | i0 | 94.444 | 8.11641791044776 | 54 | 1 | 8 | 2 | 1 | 53 | 11707 | 11655 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 5438 | 82.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7834339 | 7834339 | PRJNA1068513_S_NODE_11327_length_262_cov_5.693122_g11281_i0 | PRJNA1068513 | 11327 | 262 | 5.693122 | 14.91597964 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 124 | 4.989999999999999e-24 | NTclustered | gi|2165834670|emb|OV196177.1| | 2697049 | g11281 | i0 | 97.26 | 31.0190839694656 | 73 | 2 | 28 | 0 | 1 | 73 | 44 | 116 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8127 | 124 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7834349 | 7834349 | PRJNA1068513_S_NODE_1227_length_653_cov_4.189655_g1187_i0 | PRJNA1068513 | 1227 | 653 | 4.189655 | 27.35844715 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 124 | 1.36e-23 | NTclustered | gi|2165834303|emb|OV196009.1| | 2697049 | g1187 | i0 | 96.053 | 12.7044410413476 | 76 | 3 | 12 | 0 | 30 | 105 | 40 | 115 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8296 | 124 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7834361 | 7834361 | PRJNA1068513_S_NODE_13747_length_230_cov_3.063694_g13701_i0 | PRJNA1068513 | 13747 | 230 | 3.063694 | 7.0464962 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 71.3 | 5.67e-8 | NTclustered | gi|2560516847|emb|OY702104.1| | 2697049 | g13701 | i0 | 100 | 18.1173913043478 | 38 | 0 | 17 | 0 | 185 | 222 | 23286 | 23323 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4167 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7834364 | 7834364 | PRJNA1068513_S_NODE_1447_length_623_cov_2.816364_g1406_i0 | PRJNA1068513 | 1447 | 623 | 2.816364 | 17.54594772 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 108 | 1.3e-18 | NTclustered | gi|2165834316|emb|OV196022.1| | 2697049 | g1406 | i0 | 93.243 | 12.5040128410915 | 74 | 3 | 12 | 2 | 549 | 621 | 590 | 518 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7790 | 108 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7834427 | 7834427 | PRJNA1068513_S_NODE_5887_length_375_cov_7.559603_g5841_i0 | PRJNA1068513 | 5887 | 375 | 7.559603 | 28.34851125 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 106 | 2.7e-18 | NTclustered | gi|2165835005|emb|OV196273.1| | 2697049 | g5841 | i0 | 95.455 | 19.9973333333333 | 66 | 3 | 18 | 0 | 310 | 375 | 111 | 46 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7499 | 106 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7834430 | 7834430 | PRJNA1068513_S_NODE_6167_length_367_cov_22.768707_g6121_i0 | PRJNA1068513 | 6167 | 367 | 22.768707 | 83.56115469 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 69.4 | 3.46e-7 | NTclustered | gi|2165836883|emb|OV197187.1| | 2697049 | g6121 | i0 | 86.792 | 10.1525885558583 | 53 | 7 | 14 | 0 | 315 | 367 | 155 | 103 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 3726 | 69.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7834440 | 7834440 | PRJNA1068513_S_NODE_727_length_752_cov_4.731959_g691_i0 | PRJNA1068513 | 727 | 752 | 4.731959 | 35.58433168 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 89.8 | 5.75e-13 | NTclustered | gi|2165834218|emb|OV195924.1| | 2697049 | g691 | i0 | 96.296 | 7.69148936170213 | 54 | 2 | 7 | 0 | 1 | 54 | 301 | 354 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 5784 | 89.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 9109370 | 9109370 | PRJNA1068513_S_NODE_12908_length_246_cov_0.901734_g12862_i0 | PRJNA1068513 | 12908 | 246 | 0.901734 | 2.21826564 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 76.8 | 1.32e-9 | NTclustered | gi|2165835401|emb|OV196467.1| | 2697049 | g12862 | i0 | 94 | 20.5813008130081 | 50 | 3 | 20 | 0 | 1 | 50 | 23 | 72 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 5063 | 76.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 9109416 | 9109416 | PRJNA1068513_S_NODE_4188_length_439_cov_1.450820_g4143_i0 | PRJNA1068513 | 4188 | 439 | 1.45082 | 6.3690998 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 102 | 4.15e-17 | NTclustered | gi|2165832678|emb|OV195277.1| | 2697049 | g4143 | i0 | 96.774 | 16.1526195899772 | 62 | 0 | 14 | 2 | 379 | 439 | 131 | 71 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7091 | 102 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 9109432 | 9109432 | PRJNA1068513_S_NODE_5608_length_384_cov_1.983923_g5562_i0 | PRJNA1068513 | 5608 | 384 | 1.983923 | 7.61826432 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 67.6 | 1.31e-6 | NTclustered | gi|2165835007|emb|OV196275.1| | 2697049 | g5562 | i0 | 95.349 | 10.4010416666667 | 43 | 0 | 11 | 2 | 3 | 45 | 30237 | 30277 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 3994 | 67.6 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 9109443 | 9109443 | PRJNA1068513_S_NODE_6548_length_357_cov_1.901408_g6502_i0 | PRJNA1068513 | 6548 | 357 | 1.901408 | 6.78802656 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 69.4 | 3.36e-7 | NTclustered | gi|2165835401|emb|OV196467.1| | 2697049 | g6502 | i0 | 100 | 11.6274509803922 | 37 | 0 | 10 | 0 | 9 | 45 | 35 | 71 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 4151 | 69.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 9109452 | 9109452 | PRJNA1068513_S_NODE_7448_length_334_cov_0.896552_g7402_i0 | PRJNA1068513 | 7448 | 334 | 0.896552 | 2.99448368 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 71.3 | 8.69e-8 | NTclustered | gi|2165835005|emb|OV196273.1| | 2697049 | g7402 | i0 | 93.75 | 12.3323353293413 | 48 | 1 | 14 | 2 | 1 | 47 | 63 | 109 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 4119 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 9109467 | 9109467 | PRJNA1068513_S_NODE_8788_length_305_cov_2.219828_g8742_i0 | PRJNA1068513 | 8788 | 305 | 2.219828 | 6.7704754 | Sobemovirus PHYRMV | 3432500 | Viruses | Viruses | 58.4 | 6.11e-4 | NTclustered | gi|2047108924|ref|NC_055577.1| | 2607629 | g8742 | i0 | 100 | 0.101639344262295 | 31 | 0 | 10 | 0 | 275 | 305 | 39 | 9 | Physalis rugose mosaic virus isolate Piracicaba, complete genome | blastn | 31 | 58.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Sobelivirales | Solemoviridae | Sobemovirus | Sobemovirus PHYRMV | ||
| 9941766 | 9941766 | PRJNA1068513_S_NODE_6048_length_371_cov_1.795302_g6002_i0 | PRJNA1068513 | 6048 | 371 | 1.795302 | 6.66057042 | Betacoronavirus | 694002 | Viruses | Viruses | 65.8 | 4.53e-6 | NTclustered | gi|2557654415|emb|OY684664.1| | 2697049 | g6002 | i0 | 95.238 | 9.94878706199461 | 42 | 0 | 11 | 2 | 331 | 371 | 21926 | 21966 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3691 | 65.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 9941769 | 9941769 | PRJNA1068513_S_NODE_7068_length_343_cov_2.548148_g7022_i0 | PRJNA1068513 | 7068 | 343 | 2.548148 | 8.74014764 | Viruses | 10239 | Viruses | Viruses | 58.4 | 6.97e-4 | NTclustered | gi|2167415105|tpg|BK059322.1| | 12271 | g7022 | i0 | 100 | 9.64431486880467 | 31 | 0 | 9 | 0 | 313 | 343 | 41 | 11 | TPA_asm: Arabis mosaic virus isolate SRR5788585_ArMV segment RNA1, complete sequence | blastn | 3308 | 58.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Secoviridae | Nepovirus | Nepovirus arabis | ||
| 10385085 | 10385085 | PRJNA1068513_S_NODE_10489_length_275_cov_4.420792_g10443_i0 | PRJNA1068513 | 10489 | 275 | 4.420792 | 12.157178 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 73.1 | 1.94e-8 | NTclustered | gi|2560516847|emb|OY702104.1| | 2697049 | g10443 | i0 | 100 | 14.84 | 39 | 0 | 14 | 0 | 230 | 268 | 23280 | 23318 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4081 | 73.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 10385086 | 10385086 | PRJNA1068513_S_NODE_1049_length_684_cov_6.184943_g1010_i0 | PRJNA1068513 | 1049 | 684 | 6.184943 | 42.30501012 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 71.3 | 1.88e-7 | NTclustered | gi|2560516847|emb|OY702104.1| | 2697049 | g1010 | i0 | 100 | 5.69883040935673 | 38 | 0 | 6 | 0 | 645 | 682 | 23286 | 23323 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3898 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 10385181 | 10385181 | PRJNA1068513_S_NODE_6089_length_370_cov_1.367003_g6043_i0 | PRJNA1068513 | 6089 | 370 | 1.367003 | 5.0579111 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 73.1 | 2.7e-8 | NTclustered | gi|2560516847|emb|OY702104.1| | 2697049 | g6043 | i0 | 93.878 | 10.9486486486486 | 49 | 1 | 13 | 2 | 1 | 49 | 23323 | 23277 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4051 | 73.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11217032 | 11217032 | PRJNA1068513_S_NODE_8449_length_311_cov_4.008403_g8403_i0 | PRJNA1068513 | 8449 | 311 | 4.008403 | 12.46613333 | Viruses | 10239 | Viruses | Viruses | 106 | 2.2e-18 | NTclustered | gi|2165832605|emb|OV195107.1| | 2697049 | g8403 | i0 | 95.455 | 24.5337620578778 | 66 | 3 | 23 | 0 | 1 | 66 | 51 | 116 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7630 | 106 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11217033 | 11217033 | PRJNA1068513_S_NODE_9369_length_294_cov_2.149321_g9323_i0 | PRJNA1068513 | 9369 | 294 | 2.149321 | 6.31900374 | Orthornavirae | 2732396 | Viruses | Viruses | 65.8 | 3.5e-6 | NTclustered | gi|2047108924|ref|NC_055577.1| | 2607629 | g9323 | i0 | 100 | 12.5068027210884 | 35 | 0 | 12 | 0 | 1 | 35 | 3 | 37 | Physalis rugose mosaic virus isolate Piracicaba, complete genome | blastn | 3677 | 65.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Sobelivirales | Solemoviridae | Sobemovirus | Sobemovirus PHYRMV | ||
| 11660480 | 11660480 | PRJNA1068513_S_NODE_2050_length_564_cov_3.215886_g2008_i0 | PRJNA1068513 | 2050 | 564 | 3.215886 | 18.13759704 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 73.1 | 4.27e-8 | NTclustered | gi|2560262177|emb|OY711604.1| | 2697049 | g2008 | i0 | 97.619 | 7.46276595744681 | 42 | 1 | 7 | 0 | 8 | 49 | 21769 | 21728 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4209 | 73.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11660490 | 11660490 | PRJNA1068513_S_NODE_2630_length_521_cov_5.631696_g2586_i0 | PRJNA1068513 | 2630 | 521 | 5.631696 | 29.34113616 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 110 | 2.99e-19 | NTclustered | gi|2155043183|emb|OV015804.1| | 2697049 | g2586 | i0 | 93.333 | 15.0307101727447 | 75 | 3 | 14 | 1 | 11 | 83 | 29874 | 29948 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7831 | 110 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11660512 | 11660512 | PRJNA1068513_S_NODE_4690_length_418_cov_1.156522_g4645_i0 | PRJNA1068513 | 4690 | 418 | 1.156522 | 4.83426196 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 128 | 6.5e-25 | NTclustered | gi|2165834600|emb|OV196107.1| | 2697049 | g4645 | i0 | 97.368 | 19.9114832535885 | 76 | 1 | 18 | 1 | 3 | 78 | 242 | 316 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8323 | 128 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11660518 | 11660518 | PRJNA1068513_S_NODE_5090_length_402_cov_1.933131_g5045_i0 | PRJNA1068513 | 5090 | 402 | 1.933131 | 7.77118662 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 69.4 | 3.83e-7 | NTclustered | gi|2560516847|emb|OY702104.1| | 2697049 | g5045 | i0 | 100 | 18.636815920398 | 37 | 0 | 18 | 0 | 366 | 402 | 23286 | 23322 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 7492 | 69.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11660524 | 11660524 | PRJNA1068513_S_NODE_5530_length_386_cov_10.661342_g5484_i0 | PRJNA1068513 | 5530 | 386 | 10.661342 | 41.15278012 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 110 | 2.16e-19 | NTclustered | gi|2165835007|emb|OV196275.1| | 2697049 | g5484 | i0 | 95.652 | 19.8238341968912 | 69 | 1 | 18 | 2 | 1 | 68 | 128 | 195 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7652 | 110 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11660537 | 11660537 | PRJNA1068513_S_NODE_6810_length_349_cov_99.289855_g6764_i0 | PRJNA1068513 | 6810 | 349 | 99.289855 | 346.52159395 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 78.7 | 5.44e-10 | NTclustered | gi|2557654546|emb|OY684713.1| | 2697049 | g6764 | i0 | 92.727 | 18.1260744985673 | 55 | 2 | 15 | 2 | 295 | 348 | 21736 | 21789 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 6326 | 78.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11660551 | 11660551 | PRJNA1068513_S_NODE_7930_length_322_cov_3.200803_g7884_i0 | PRJNA1068513 | 7930 | 322 | 3.200803 | 10.30658566 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 67.6 | 1.08e-6 | NTclustered | gi|2557649546|emb|OY678249.1| | 2697049 | g7884 | i0 | 95.238 | 12.8167701863354 | 42 | 2 | 13 | 0 | 281 | 322 | 10393 | 10434 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4127 | 67.6 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11660567 | 11660567 | PRJNA1068513_S_NODE_9430_length_293_cov_1.063636_g9384_i0 | PRJNA1068513 | 9430 | 293 | 1.063636 | 3.11645348 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 56.5 | 0.002 | NTclustered | gi|2557636725|emb|OY693138.1| | 2697049 | g9384 | i0 | 96.97 | 10.7576791808874 | 33 | 1 | 11 | 0 | 261 | 293 | 23674 | 23706 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3152 | 56.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11660573 | 11660573 | PRJNA1068513_S_NODE_9950_length_284_cov_1.398104_g9904_i0 | PRJNA1068513 | 9950 | 284 | 1.398104 | 3.97061536 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 63.9 | 1.21e-5 | NTclustered | gi|2560516847|emb|OY702104.1| | 2697049 | g9904 | i0 | 95 | 12.0316901408451 | 40 | 2 | 14 | 0 | 1 | 40 | 23314 | 23275 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3417 | 63.9 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 12492464 | 12492464 | PRJNA1068513_S_NODE_3750_length_459_cov_6.443005_g3705_i0 | PRJNA1068513 | 3750 | 459 | 6.443005 | 29.57339295 | Viruses | 10239 | Viruses | Viruses | 67.6 | 1.59e-6 | NTclustered | gi|2557650385|emb|OY679204.1| | 2697049 | g3705 | i0 | 100 | 8.17429193899782 | 36 | 0 | 8 | 0 | 418 | 453 | 21735 | 21770 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3752 | 67.6 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 12492475 | 12492475 | PRJNA1068513_S_NODE_8670_length_307_cov_3.115385_g8624_i0 | PRJNA1068513 | 8670 | 307 | 3.115385 | 9.56423195 | Viruses | 10239 | Viruses | Viruses | 71.3 | 7.91e-8 | NTclustered | gi|2560271083|emb|OY714119.1| | 2697049 | g8624 | i0 | 100 | 12.8110749185668 | 38 | 0 | 12 | 0 | 270 | 307 | 4297 | 4334 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3933 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 12935550 | 12935550 | PRJNA1068513_S_NODE_11031_length_267_cov_1.685567_g10985_i0 | PRJNA1068513 | 11031 | 267 | 1.685567 | 4.50046389 | Sobemovirus PHYRMV | 3432500 | Viruses | Viruses | 52.8 | 0.024 | NTclustered | gi|2047108924|ref|NC_055577.1| | 2607629 | g10985 | i0 | 100 | 0.104868913857678 | 28 | 0 | 10 | 0 | 1 | 28 | 9 | 36 | Physalis rugose mosaic virus isolate Piracicaba, complete genome | blastn | 28 | 52.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Sobelivirales | Solemoviridae | Sobemovirus | Sobemovirus PHYRMV | ||
| 12935551 | 12935551 | PRJNA1068513_S_NODE_1111_length_673_cov_3.950000_g1071_i0 | PRJNA1068513 | 1111 | 673 | 3.95 | 26.5835 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 67.6 | 2.4e-6 | NTclustered | gi|2557646044|emb|OY675404.1| | 2697049 | g1071 | i0 | 97.436 | 5.50965824665676 | 39 | 1 | 6 | 0 | 635 | 673 | 18437 | 18475 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3708 | 67.6 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 12935554 | 12935554 | PRJNA1068513_S_NODE_11251_length_264_cov_1.225131_g11205_i0 | PRJNA1068513 | 11251 | 264 | 1.225131 | 3.23434584 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 87.9 | 6.61e-13 | NTclustered | gi|2165834194|emb|OV195900.1| | 2697049 | g11205 | i0 | 93.22 | 24.8409090909091 | 59 | 4 | 22 | 0 | 206 | 264 | 198 | 140 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 6558 | 87.9 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 12935580 | 12935580 | PRJNA1068513_S_NODE_13731_length_231_cov_2.050633_g13685_i0 | PRJNA1068513 | 13731 | 231 | 2.050633 | 4.73696223 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 65.8 | 2.65e-6 | NTclustered | gi|2524369208|emb|OY086875.1| | 2697049 | g13685 | i0 | 97.368 | 15.4155844155844 | 38 | 1 | 16 | 0 | 3 | 40 | 10371 | 10334 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 3561 | 65.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 12935593 | 12935593 | PRJNA1068513_S_NODE_2171_length_555_cov_72.267635_g2129_i0 | PRJNA1068513 | 2171 | 555 | 72.267635 | 401.08537425 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 73.1 | 4.19e-8 | NTclustered | gi|2165832678|emb|OV195277.1| | 2697049 | g2129 | i0 | 95.556 | 13.6468468468468 | 45 | 2 | 16 | 0 | 1 | 45 | 87 | 131 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7574 | 73.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 12935625 | 12935625 | PRJNA1068513_S_NODE_3971_length_449_cov_1.840426_g3926_i0 | PRJNA1068513 | 3971 | 449 | 1.840426 | 8.26351274 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 71.3 | 1.2e-7 | NTclustered | gi|2557643126|emb|OY672661.1| | 2697049 | g3926 | i0 | 100 | 9.47438752783964 | 38 | 0 | 8 | 0 | 409 | 446 | 19232 | 19269 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4254 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 12935664 | 12935664 | PRJNA1068513_S_NODE_7431_length_334_cov_1.946360_g7385_i0 | PRJNA1068513 | 7431 | 334 | 1.94636 | 6.5008424 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 111 | 5.12e-20 | NTclustered | gi|2165834670|emb|OV196177.1| | 2697049 | g7385 | i0 | 94.444 | 23.9011976047904 | 72 | 4 | 22 | 0 | 64 | 135 | 46 | 117 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7983 | 111 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 12935677 | 12935677 | PRJNA1068513_S_NODE_871_length_715_cov_32.066978_g833_i0 | PRJNA1068513 | 871 | 715 | 32.066978 | 229.2788927 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 124 | 1.49e-23 | NTclustered | gi|2165834303|emb|OV196009.1| | 2697049 | g833 | i0 | 96.053 | 11.6601398601399 | 76 | 3 | 11 | 0 | 611 | 686 | 115 | 40 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8337 | 124 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 14210486 | 14210486 | PRJNA1068513_S_NODE_10432_length_276_cov_2.704433_g10386_i0 | PRJNA1068513 | 10432 | 276 | 2.704433 | 7.46423508 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 56.5 | 0.002 | NTclustered | gi|2560516847|emb|OY702104.1| | 2697049 | g10386 | i0 | 92.308 | 11.1666666666667 | 39 | 3 | 14 | 0 | 238 | 276 | 23275 | 23313 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3082 | 56.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 14210507 | 14210507 | PRJNA1068513_S_NODE_13072_length_244_cov_2.292398_g13026_i0 | PRJNA1068513 | 13072 | 244 | 2.292398 | 5.59345112 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 58.4 | 4.73e-4 | NTclustered | gi|2557641183|emb|OY671812.1| | 2697049 | g13026 | i0 | 94.737 | 12.9590163934426 | 38 | 1 | 16 | 1 | 5 | 42 | 16454 | 16418 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3162 | 58.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;