RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1068513" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1068513 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2732376 2732376 PRJNA1068513_S_NODE_13803_length_228_cov_3.167742_g13757_i0 PRJNA1068513 13803 228 3.167742 7.22245176 Asterias rubens 7604 Echinodermata other_Eukaryota 80.5 9.32e-11   NTclustered gi|1834267896|ref|XM_033789087.1| 7604 g13757 i0 84.337 0.486842105263158 83 11 36 2 13 94 1843 1924 PREDICTED: Asterias rubens choline dehydrogenase, mitochondrial-like (LOC117304561), mRNA blastn 111 80.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
20582970 20582970 PRJNA1068513_S_NODE_12517_length_249_cov_1.221591_g12471_i0 PRJNA1068513 12517 249 1.221591 3.04176159 Lytechinus pictus 7653 Echinodermata other_Eukaryota 148 2.7899999999999996e-31   NTclustered gi|2707411298|ref|XM_064095271.1| 7653 g12471 i0 79.279 3.2570281124498 222 38 88 8 8 225 348 131 PREDICTED: Lytechinus pictus proteasome subunit alpha type-7 (LOC129276836), mRNA blastn 811 148 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;