RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1068513" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1068513 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7834358 7834358 PRJNA1068513_S_NODE_1347_length_635_cov_8.567616_g1307_i0 PRJNA1068513 1347 635 8.567616 54.4043616 Cryptococcus neoformans 5207 Fungi Fungi 357 1.19e-93   NTclustered gi|799318120|ref|XM_012191959.1| 235443 g1307 i0 85.143 60.2535433070866 350 50 55 2 36 384 170 518 Cryptococcus neoformans var. grubii H99 peptidyl-prolyl cis-trans isomerase (CNAG_03627), mRNA blastn 38261 357 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus neoformans
19307516 19307516 PRJNA1068513_S_NODE_8996_length_301_cov_2.122807_g8950_i0 PRJNA1068513 8996 301 2.122807 6.38964907 Wallemia mellicola 1708541 Fungi Fungi 111 4.56e-20   NTclustered gi|588260508|ref|XM_006959346.1| 671144 g8950 i0 85.185 2.43189368770764 108 16 36 0 107 214 612 505 Wallemia mellicola CBS 633.66 40S ribosomal protein S5-1 partial mRNA blastn 732 111 1 Eukaryota Opisthokonta Fungi Basidiomycota Wallemiomycetes Wallemiales Wallemiaceae Wallemia Wallemia mellicola
25239875 25239875 PRJNA1068513_S_NODE_5420_length_390_cov_7.315457_g5374_i0 PRJNA1068513 5420 390 7.315457 28.5302823 root 1 Root_unresolved Root_unresolved 58.4 8.01e-4   NTclustered gi|930416156|ref|XM_014326876.1| 1186058 g5374 i0 100 8.9 31 0 8 0 1 31 943 913 Trichosporon asahii var. asahii CBS 2479 uncharacterized protein (A1Q1_07892), partial mRNA blastn 3471 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Trichosporon Trichosporon asahii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;