RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1067370" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1067370 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1013280 1013280 PRJNA1067370_P_NODE_45921_length_307_cov_1.316239_g45373_i0 PRJNA1067370 45921 307 1.316239 4.04085373 Fungi 4751 Fungi Fungi 60.2 1.71e-4   NTclustered gi|2028315242|ref|XM_040891245.1| 61395 g45373 i0 88 1.17915309446254 50 6 16 0 8 57 192 143 Linderina pennispora ATP synthase subunit beta, mitochondrial (DL89DRAFT_320930), partial mRNA blastn 362 60.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
9108391 9108391 PRJNA1067370_P_NODE_33028_length_343_cov_1.355556_g32480_i0 PRJNA1067370 33028 343 1.355556 4.64955708 Linderina pennispora 61395 Fungi Fungi 298 3.77e-76   NTclustered gi|2028320758|ref|XM_040890372.1| 61395 g32480 i0 82.934 80.7055393586006 334 53 97 4 6 337 347 16 Linderina pennispora Mal s 6 allergen (DL89DRAFT_293224), partial mRNA blastn 27682 298 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
19306356 19306356 PRJNA1067370_P_NODE_21576_length_407_cov_1.005988_g21028_i0 PRJNA1067370 21576 407 1.005988 4.09437116 Basidiobolus haptosporus 90248 Fungi Fungi 211 6.09e-50   NTclustered gi|358030845|dbj|AB609156.1| 90248 g21028 i0 76.485 40.4226044226044 404 85 98 10 1 399 1515 1117 Basidiobolus haptosporus EF2 gene for translation elongation factor 2, partial cds, strain: NRRL 28635 blastn 16452 211 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus haptosporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;