contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA1067370" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1013258 | 1013258 | PRJNA1067370_P_NODE_3741_length_897_cov_2.245146_g3298_i0 | PRJNA1067370 | 3741 | 897 | 2.245146 | 20.13895962 | Opitutaceae | 134623 | Bacteria | Bacteria | 1127 | 0 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g3298 | i0 | 89.369 | 133.289855072464 | 903 | 87 | 100 | 8 | 1 | 897 | 2833490 | 2834389 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 119561 | 1127 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 1455489 | 1455489 | PRJNA1067370_P_NODE_3162_length_964_cov_2.450056_g2744_i0 | PRJNA1067370 | 3162 | 964 | 2.450056 | 23.61853984 | Candidatus Xiphinematobacter sp. | 1903058 | Bacteria | Bacteria | 987 | 0 | NTclustered | gi|1966854496|gb|CP068475.1| | 1903058 | g2744 | i0 | 87.035 | 140.215767634855 | 887 | 99 | 91 | 14 | 86 | 958 | 915855 | 914971 | MAG: Candidatus Xiphinematobacter sp. isolate P21 chromosome, complete genome | blastn | 135168 | 987 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Candidatus Xiphinematobacter | Candidatus Xiphinematobacter sp. | |||
| 1455885 | 1455885 | PRJNA1067370_P_NODE_92702_length_247_cov_1.149425_g92153_i0 | PRJNA1067370 | 92702 | 247 | 1.149425 | 2.83907975 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 167 | 7.64e-37 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g92153 | i0 | 88.489 | 103.068825910931 | 139 | 14 | 55 | 2 | 111 | 247 | 305 | 167 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 25458 | 167 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 2731222 | 2731222 | PRJNA1067370_P_NODE_20543_length_415_cov_1.216374_g19995_i0 | PRJNA1067370 | 20543 | 415 | 1.216374 | 5.0479521 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 348 | 4.54e-91 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g19995 | i0 | 84.115 | 133.698795180723 | 384 | 36 | 92 | 14 | 35 | 415 | 1491 | 1852 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 55485 | 348 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 10383819 | 10383819 | PRJNA1067370_P_NODE_107609_length_243_cov_0.905882_g107060_i0 | PRJNA1067370 | 107609 | 243 | 0.905882 | 2.20129326 | Termitidicoccus mucosus | 1184151 | Bacteria | Bacteria | 202 | 2.0599999999999995e-47 | NTclustered | gi|2724066732|gb|CP109796.1| | 1184151 | g107060 | i0 | 82.008 | 20.4855967078189 | 239 | 41 | 98 | 2 | 1 | 238 | 3599604 | 3599367 | Termitidicoccus mucosus strain TSB47 chromosome, complete genome | blastn | 4978 | 202 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Termitidicoccus | Termitidicoccus mucosus | |
| 11659218 | 11659218 | PRJNA1067370_P_NODE_115490_length_241_cov_0.875000_g114941_i0 | PRJNA1067370 | 115490 | 241 | 0.875 | 2.10875 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 388 | 1.46e-103 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g114941 | i0 | 96.203 | 246.551867219917 | 237 | 9 | 98 | 0 | 2 | 238 | 3992084 | 3991848 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 59419 | 388 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 11659730 | 11659730 | PRJNA1067370_P_NODE_80990_length_251_cov_0.865169_g80441_i0 | PRJNA1067370 | 80990 | 251 | 0.865169 | 2.17157419 | Prosthecobacter dejongeii | 48465 | Bacteria | Bacteria | 398 | 2.5399999999999994e-106 | NTclustered | gi|183579826|emb|AM905423.1| | 48465 | g80441 | i0 | 95.238 | 125.693227091633 | 252 | 11 | 100 | 1 | 1 | 251 | 1632 | 1381 | Prosthecobacter dejongeii partial 23S rRNA gene, strain DSM12251 | blastn | 31549 | 398 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter dejongeii | |
| 16757526 | 16757526 | PRJNA1067370_P_NODE_115274_length_241_cov_0.916667_g114725_i0 | PRJNA1067370 | 115274 | 241 | 0.916667 | 2.20916747 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 147 | 9.67e-31 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g114725 | i0 | 79.621 | 9.10373443983402 | 211 | 38 | 86 | 5 | 31 | 238 | 2693584 | 2693376 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 2194 | 147 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 18032498 | 18032498 | PRJNA1067370_P_NODE_30475_length_353_cov_1.653571_g29927_i0 | PRJNA1067370 | 30475 | 353 | 1.653571 | 5.83710563 | Verrucomicrobia bacterium IMCC26134 | 1637999 | Bacteria | Bacteria | 448 | 3.639999999999999e-121 | NTclustered | gi|807238858|gb|CP011265.1| | 1637999 | g29927 | i0 | 89.518 | 114.178470254958 | 353 | 37 | 100 | 0 | 1 | 353 | 1902348 | 1901996 | Verrucomicrobia bacterium IMCC26134, complete genome | blastn | 40305 | 448 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium IMCC26134 | |||||
| 18032764 | 18032764 | PRJNA1067370_P_NODE_6755_length_685_cov_2.094771_g6243_i0 | PRJNA1067370 | 6755 | 685 | 2.094771 | 14.34918135 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 989 | 0 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g6243 | i0 | 92.701 | 236.211678832117 | 685 | 50 | 100 | 0 | 1 | 685 | 2749133 | 2748449 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 161805 | 989 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21857910 | 21857910 | PRJNA1067370_P_NODE_79798_length_251_cov_0.865169_g79249_i0 | PRJNA1067370 | 79798 | 251 | 0.865169 | 2.17157419 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 302 | 2.0500000000000002e-77 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g79249 | i0 | 89.3 | 41.6653386454183 | 243 | 22 | 96 | 4 | 1 | 241 | 2910896 | 2910656 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 10458 | 302 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 23132980 | 23132980 | PRJNA1067370_P_NODE_17199_length_449_cov_1.630319_g16651_i0 | PRJNA1067370 | 17199 | 449 | 1.630319 | 7.32013231 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 220 | 1.1299999999999999e-52 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g16651 | i0 | 86.207 | 261.552338530067 | 203 | 28 | 45 | 0 | 1 | 203 | 2834372 | 2834574 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 117437 | 220 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 24406695 | 24406695 | PRJNA1067370_P_NODE_28120_length_364_cov_3.611684_g27572_i0 | PRJNA1067370 | 28120 | 364 | 3.611684 | 13.14652976 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 372 | 2.3299999999999995e-98 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g27572 | i0 | 86.04 | 89.3791208791209 | 351 | 43 | 96 | 6 | 13 | 361 | 153 | 499 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 32534 | 372 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;