RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1067370" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1067370 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7833179 7833179 PRJNA1067370_P_NODE_11107_length_547_cov_2.246835_g10565_i0 PRJNA1067370 11107 547 2.246835 12.29018745 Amphimedon queenslandica 400682 Porifera other_Eukaryota 73.1 4.13e-8   NTclustered gi|1133449136|ref|XM_019997898.1| 400682 g10565 i0 97.619 0.076782449725777 42 1 8 0 456 497 304 263 PREDICTED: Amphimedon queenslandica putative transmembrane protein DDB_G0267530 (LOC109582866), mRNA blastn 42 73.1 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica
7833740 7833740 PRJNA1067370_P_NODE_9127_length_600_cov_1.110057_g8595_i0 PRJNA1067370 9127 600 1.110057 6.660342 Corticium candelabrum 121492 Porifera other_Eukaryota 110 3.47e-19   NTclustered gi|2664227643|ref|XM_062653746.1| 121492 g8595 i0 85.577 0.865 104 15 17 0 468 571 311 208 PREDICTED: Corticium candelabrum cell death-inducing p53-target protein 1 homolog (LOC134185863), mRNA blastn 519 110 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
12934338 12934338 PRJNA1067370_P_NODE_112171_length_242_cov_0.887574_g111622_i0 PRJNA1067370 112171 242 0.887574 2.14792908 Sycon ciliatum 27933 Porifera other_Eukaryota 58.4 4.69e-4   NTclustered gi|2732921575|ref|XM_065327646.1| 27933 g111622 i0 100 15.3347107438017 31 0 13 0 17 47 3703 3733 PREDICTED: Sycon ciliatum serine-rich adhesin for platelets-like (LOC135814520), mRNA blastn 3711 58.4 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
14209574 14209574 PRJNA1067370_P_NODE_40892_length_316_cov_3.934156_g40344_i0 PRJNA1067370 40892 316 3.934156 12.43193296 Suberites ficus 86007 Porifera other_Eukaryota 60.2 1.77e-4   NTclustered gi|78190680|gb|DQ206542.1| 86007 g40344 i0 97.143 0.110759493670886 35 1 11 0 185 219 688 654 Suberites fuscus isolate TOA57 chaperonin complex component TCP-1 beta subunit mRNA, partial cds blastn 35 60.2 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Suberitidae Suberites Suberites ficus
19306794 19306794 PRJNA1067370_P_NODE_89996_length_248_cov_0.880000_g89447_i0 PRJNA1067370 89996 248 0.88 2.1824 Halisarca dujardinii 2583056 Porifera other_Eukaryota 183 7.62e-42   NTclustered gi|1728504629|gb|MK520982.1| 2583056 g89447 i0 80.488 12.4274193548387 246 42 98 6 2 244 1218 976 Halisarca dujardinii catalase (CATA) mRNA, partial cds blastn 3082 183 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Chondrillida Halisarcidae Halisarca Halisarca dujardinii
20139746 20139746 PRJNA1067370_P_NODE_67096_length_269_cov_1.397959_g66547_i0 PRJNA1067370 67096 269 1.397959 3.76050971 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 0.025   NTclustered gi|1133460773|ref|XM_019995931.1| 400682 g66547 i0 96.875 0.342007434944238 32 0 12 1 175 205 923 892 PREDICTED: Amphimedon queenslandica protein transport protein sec31-like (LOC109581643), transcript variant X1, mRNA blastn 92 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;