contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA1067370" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2731427 | 2731427 | PRJNA1067370_P_NODE_48883_length_299_cov_1.048673_g48335_i0 | PRJNA1067370 | 48883 | 299 | 1.048673 | 3.13553227 | Minicystis rosea | 888845 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g48335 | i0 | 100 | 0.0936454849498328 | 28 | 0 | 9 | 0 | 227 | 254 | 11150877 | 11150850 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 2731598 | 2731598 | PRJNA1067370_P_NODE_79263_length_251_cov_1.297753_g78714_i0 | PRJNA1067370 | 79263 | 251 | 1.297753 | 3.25736003 | Corallococcus coralloides | 184914 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|380727201|gb|CP003389.1| | 1144275 | g78714 | i0 | 94.444 | 0.143426294820717 | 36 | 1 | 14 | 1 | 162 | 196 | 8913597 | 8913632 | Corallococcus coralloides DSM 2259, complete genome | blastn | 36 | 54.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus coralloides | ||
| 4007276 | 4007276 | PRJNA1067370_P_NODE_34864_length_336_cov_1.171103_g34316_i0 | PRJNA1067370 | 34864 | 336 | 1.171103 | 3.93490608 | Archangium violaceum | 83451 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|2619762464|gb|CP137851.1| | 83451 | g34316 | i0 | 96.875 | 0.19047619047619 | 32 | 1 | 10 | 0 | 52 | 83 | 4562695 | 4562664 | Archangium violaceum strain KYC5002 chromosome, complete genome | blastn | 64 | 54.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 4841337 | 4841337 | PRJNA1067370_P_NODE_68584_length_267_cov_1.051546_g68035_i0 | PRJNA1067370 | 68584 | 267 | 1.051546 | 2.80762782 | Polyangiaceae | 49 | Bacteria | Bacteria | 372 | 1.65e-98 | NTclustered | gi|169977285|emb|AM946600.1| | 52 | g68035 | i0 | 91.791 | 193.786516853933 | 268 | 20 | 100 | 2 | 1 | 267 | 2570 | 2304 | Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 | blastn | 51741 | 372 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 6558942 | 6558942 | PRJNA1067370_P_NODE_67926_length_268_cov_1.184615_g67377_i0 | PRJNA1067370 | 67926 | 268 | 1.184615 | 3.1747682 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 473 | 4.419999999999999e-129 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g67377 | i0 | 98.507 | 152.208955223881 | 268 | 4 | 100 | 0 | 1 | 268 | 3943877 | 3944144 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 40792 | 473 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 7833742 | 7833742 | PRJNA1067370_P_NODE_91587_length_248_cov_0.880000_g91038_i0 | PRJNA1067370 | 91587 | 248 | 0.88 | 2.1824 | Corallococcus sp. EGB | 1521117 | Bacteria | Bacteria | 259 | 1.23e-64 | NTclustered | gi|2094564806|gb|CP079946.1| | 1521117 | g91038 | i0 | 87.013 | 3.57661290322581 | 231 | 29 | 93 | 1 | 17 | 246 | 2285457 | 2285227 | Corallococcus sp. EGB chromosome, complete genome | blastn | 887 | 259 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus sp. EGB | ||
| 9108640 | 9108640 | PRJNA1067370_P_NODE_7608_length_650_cov_3.077990_g7083_i0 | PRJNA1067370 | 7608 | 650 | 3.07799 | 20.006935 | Nannocystis punicea | 2995304 | Bacteria | Bacteria | 357 | 1.22e-93 | NTclustered | gi|2415023655|gb|CP114040.1| | 2995304 | g7083 | i0 | 82.326 | 72.0415384615385 | 430 | 58 | 66 | 12 | 24 | 449 | 5377565 | 5377150 | Nannocystis poenicansa strain FL3 chromosome, complete genome | blastn | 46827 | 357 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis punicea | |||
| 10383855 | 10383855 | PRJNA1067370_P_NODE_111989_length_242_cov_0.911243_g111440_i0 | PRJNA1067370 | 111989 | 242 | 0.911243 | 2.20520806 | Stigmatella aurantiaca | 41 | Bacteria | Bacteria | 279 | 9.19e-71 | NTclustered | gi|309390350|gb|CP002271.1| | 378806 | g111440 | i0 | 87.603 | 103.913223140496 | 242 | 28 | 99 | 2 | 2 | 242 | 3613763 | 3613523 | Stigmatella aurantiaca DW4/3-1, complete genome | blastn | 25147 | 279 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 15040963 | 15040963 | PRJNA1067370_P_NODE_57912_length_283_cov_1.261905_g57363_i0 | PRJNA1067370 | 57912 | 283 | 1.261905 | 3.57119115 | Polyangiales | 3031712 | Bacteria | Bacteria | 396 | 1.05e-105 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g57363 | i0 | 91.873 | 230.014134275618 | 283 | 23 | 100 | 0 | 1 | 283 | 9679047 | 9679329 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 65094 | 396 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 15483780 | 15483780 | PRJNA1067370_P_NODE_67873_length_268_cov_1.184615_g67324_i0 | PRJNA1067370 | 67873 | 268 | 1.184615 | 3.1747682 | Pyxidicoccus parkwayensis | 2813578 | Bacteria | Bacteria | 394 | 3.54e-105 | NTclustered | gi|1998505907|gb|CP071090.1| | 2813578 | g67324 | i0 | 93.284 | 326.544776119403 | 268 | 17 | 99 | 1 | 1 | 267 | 2161245 | 2161512 | Pyxidicoccus parkwaysis strain SCPEA02 chromosome | blastn | 87514 | 394 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus parkwayensis | ||
| 19306572 | 19306572 | PRJNA1067370_P_NODE_55256_length_287_cov_1.327103_g54707_i0 | PRJNA1067370 | 55256 | 287 | 1.327103 | 3.80878561 | Nannocystis punicea | 2995304 | Bacteria | Bacteria | 403 | 6.36e-108 | NTclustered | gi|2415023655|gb|CP114040.1| | 2995304 | g54707 | i0 | 91.986 | 28.7526132404181 | 287 | 23 | 100 | 0 | 1 | 287 | 1867075 | 1866789 | Nannocystis poenicansa strain FL3 chromosome, complete genome | blastn | 8252 | 403 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis punicea | |||
| 20582144 | 20582144 | PRJNA1067370_P_NODE_68117_length_267_cov_2.360825_g67568_i0 | PRJNA1067370 | 68117 | 267 | 2.360825 | 6.30340275 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 364 | 2.759999999999999e-96 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g67568 | i0 | 91.353 | 206.501872659176 | 266 | 23 | 99 | 0 | 2 | 267 | 3942267 | 3942002 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 55136 | 364 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 24406656 | 24406656 | PRJNA1067370_P_NODE_2340_length_1097_cov_2.235352_g1976_i0 | PRJNA1067370 | 2340 | 1097 | 2.235352 | 24.52181144 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 1611 | 0 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g1976 | i0 | 93.182 | 136.424794895169 | 1100 | 70 | 100 | 5 | 1 | 1097 | 7090688 | 7089591 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 149658 | 1611 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;