RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1067370" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1067370 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5283758 5283758 PRJNA1067370_P_NODE_55885_length_286_cov_1.413146_g55336_i0 PRJNA1067370 55885 286 1.413146 4.04159756 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 54.7 0.007   NTclustered gi|2907625638|emb|OZ223198.1| 2447898 g55336 i0 100 0.101398601398601 29 0 10 0 256 284 1078636 1078608 MAG: Candidatus Kapaibacterium sp. isolate 09316a08-0405-4927-8c64-54324f316411 genome assembly, chromosome: 2 blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
21857777 21857777 PRJNA1067370_P_NODE_57598_length_283_cov_2.452381_g57049_i0 PRJNA1067370 57598 283 2.452381 6.94023823 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 276 1.4199999999999999e-69   NTclustered gi|1869359902|gb|CP058732.1| 2447898 g57049 i0 89.189 428.802120141343 222 23 78 1 63 283 421844 422065 MAG: Candidatus Kapaibacterium sp. isolate Ch6 chromosome, complete genome blastn 121351 276 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;