RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1067370" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1067370 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
181131 181131 PRJNA1067370_P_NODE_77081_length_254_cov_1.464088_g76532_i0 PRJNA1067370 77081 254 1.464088 3.71878352 Marine Group I thaumarchaeote 2511932 Archaea Archaea 185 2.1799999999999994e-42   NTclustered gi|2277046463|gb|CP054849.1| 2511932 g76532 i0 87.654 23.1181102362205 162 16 63 4 91 250 242268 242427 MAG: Marine Group I thaumarchaeote isolate JZB445 chromosome blastn 5872 185 1 Archaea Marine Group I Thermoproteati Nitrososphaerota         Marine Group I thaumarchaeote
2731784 2731784 PRJNA1067370_S_NODE_7203_length_221_cov_52.439189_g7177_i0 PRJNA1067370 7203 221 52.439189 115.89060769 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.02   NTclustered gi|323706731|gb|CP002529.1| 985053 g7177 i0 100 0.126696832579186 28 0 13 0 173 200 336100 336127 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
23133557 23133557 PRJNA1067370_S_NODE_5999_length_245_cov_5.098837_g5973_i0 PRJNA1067370 5999 245 5.098837 12.49215065 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.022   NTclustered gi|323706731|gb|CP002529.1| 985053 g5973 i0 100 0.114285714285714 28 0 11 0 143 170 336100 336127 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;