contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA1067370" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 181325 | 181325 | PRJNA1067370_S_NODE_661_length_514_cov_8.619048_g635_i0 | PRJNA1067370 | 661 | 514 | 8.619048 | 44.30190672 | Leptotrichia alba | 3239304 | Bacteria | Bacteria | 950 | 0 | NTclustered | gi|2785244533|gb|CP165647.1| | 3239304 | g635 | i0 | 100 | 415.599221789883 | 514 | 0 | 100 | 0 | 1 | 514 | 88873 | 88360 | Leptotrichia sp. HSP-536 chromosome, complete genome | blastn | 213618 | 950 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia alba | ||
| 1013385 | 1013385 | PRJNA1067370_S_NODE_421_length_602_cov_1.262760_g395_i0 | PRJNA1067370 | 421 | 602 | 1.26276 | 7.6018152 | Fusobacterium | 848 | Bacteria | Bacteria | 1059 | 0 | NTclustered | gi|15028908|emb|AJ307974.1| | 851 | g395 | i0 | 99.655 | 458.855481727575 | 579 | 2 | 96 | 0 | 1 | 579 | 594 | 16 | Fusobacterium nucleatum 23S rRNA gene, strain DSM 20482 | blastn | 276231 | 1064 | 0.995300751879699 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 3563885 | 3563885 | PRJNA1067370_P_NODE_6283_length_708_cov_1.807874_g5777_i0 | PRJNA1067370 | 6283 | 708 | 1.807874 | 12.79974792 | Fusobacterium | 848 | Bacteria | Bacteria | 1253 | 0 | NTclustered | gi|2707716151|gb|CP077166.1| | 76857 | g5777 | i0 | 98.588 | 477.314971751412 | 708 | 10 | 100 | 0 | 1 | 708 | 294787 | 294080 | Fusobacterium polymorphum strain SB047 chromosome | blastn | 337939 | 1253 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 4841227 | 4841227 | PRJNA1067370_P_NODE_17804_length_442_cov_1.417344_g17256_i0 | PRJNA1067370 | 17804 | 442 | 1.417344 | 6.26466048 | Leptotrichia | 32067 | Bacteria | Bacteria | 795 | 0 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g17256 | i0 | 99.095 | 187.509049773756 | 442 | 4 | 100 | 0 | 1 | 442 | 458 | 17 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 82879 | 795 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 6116348 | 6116348 | PRJNA1067370_P_NODE_17505_length_445_cov_2.459677_g16957_i0 | PRJNA1067370 | 17505 | 445 | 2.459677 | 10.94556265 | Fusobacterium | 848 | Bacteria | Bacteria | 817 | 0 | NTclustered | gi|15028908|emb|AJ307974.1| | 851 | g16957 | i0 | 99.775 | 434.101123595506 | 445 | 1 | 100 | 0 | 1 | 445 | 25 | 469 | Fusobacterium nucleatum 23S rRNA gene, strain DSM 20482 | blastn | 193175 | 817 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 6558958 | 6558958 | PRJNA1067370_P_NODE_70506_length_264_cov_1.157068_g69957_i0 | PRJNA1067370 | 70506 | 264 | 1.157068 | 3.05465952 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 483 | 7.219999999999998e-132 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g69957 | i0 | 99.621 | 509.181818181818 | 264 | 1 | 100 | 0 | 1 | 264 | 71231 | 71494 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 134424 | 483 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 6559007 | 6559007 | PRJNA1067370_P_NODE_78886_length_251_cov_1.926966_g78337_i0 | PRJNA1067370 | 78886 | 251 | 1.926966 | 4.83668466 | Fusobacterium hwasookii | 1583098 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2078812864|gb|CP071092.1| | 1583098 | g78337 | i0 | 96.875 | 0.239043824701195 | 32 | 1 | 13 | 0 | 23 | 54 | 516053 | 516022 | Fusobacterium hwasookii strain THCT14E2 chromosome, complete genome | blastn | 60 | 54.7 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium hwasookii | ||
| 8666469 | 8666469 | PRJNA1067370_P_NODE_52407_length_291_cov_1.899083_g51858_i0 | PRJNA1067370 | 52407 | 291 | 1.899083 | 5.52633153 | Streptobacillus | 34104 | Bacteria | Bacteria | 52.8 | 0.027 | NTclustered | gi|1356701568|gb|CP027400.1| | 34105 | g51858 | i0 | 100 | 0.288659793814433 | 28 | 0 | 10 | 0 | 177 | 204 | 1008885 | 1008912 | Streptobacillus moniliformis strain FDAARGOS_310 chromosome, complete genome | blastn | 84 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Streptobacillus | Streptobacillus moniliformis | ||
| 11216700 | 11216700 | PRJNA1067370_P_NODE_6389_length_703_cov_1.834921_g5881_i0 | PRJNA1067370 | 6389 | 703 | 1.834921 | 12.89949463 | Cetobacterium | 180162 | Bacteria | Bacteria | 1221 | 0 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g5881 | i0 | 98.011 | 508.576102418208 | 704 | 13 | 100 | 1 | 1 | 703 | 278695 | 279398 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 357529 | 1221 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 11659291 | 11659291 | PRJNA1067370_P_NODE_19030_length_429_cov_1.514045_g18482_i0 | PRJNA1067370 | 19030 | 429 | 1.514045 | 6.49525305 | Fusobacterium varium | 856 | Bacteria | Bacteria | 52.8 | 0.041 | NTclustered | gi|2318938525|gb|CP107203.1| | 856 | g18482 | i0 | 100 | 0.0652680652680653 | 28 | 0 | 7 | 0 | 398 | 425 | 1619986 | 1619959 | MAG: Fusobacterium varium isolate KR001_HAM_0062 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 11659638 | 11659638 | PRJNA1067370_P_NODE_66750_length_269_cov_3.459184_g66201_i0 | PRJNA1067370 | 66750 | 269 | 3.459184 | 9.30520496 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 468 | 2.06e-127 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g66201 | i0 | 98.134 | 392.568773234201 | 268 | 5 | 99 | 0 | 2 | 269 | 52842 | 53109 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 105601 | 468 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 14209776 | 14209776 | PRJNA1067370_P_NODE_74472_length_258_cov_1.291892_g73923_i0 | PRJNA1067370 | 74472 | 258 | 1.291892 | 3.33308136 | Leptotrichia alba | 3239304 | Bacteria | Bacteria | 460 | 3.29e-125 | NTclustered | gi|2785244533|gb|CP165647.1| | 3239304 | g73923 | i0 | 98.837 | 206.306201550388 | 258 | 3 | 100 | 0 | 1 | 258 | 88541 | 88284 | Leptotrichia sp. HSP-536 chromosome, complete genome | blastn | 53227 | 460 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia alba | ||
| 16757493 | 16757493 | PRJNA1067370_P_NODE_110634_length_242_cov_0.911243_g110085_i0 | PRJNA1067370 | 110634 | 242 | 0.911243 | 2.20520806 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 283 | 7.1e-72 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g110085 | i0 | 88.889 | 4.83057851239669 | 234 | 20 | 95 | 6 | 11 | 241 | 271028 | 270798 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 1169 | 283 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 16758204 | 16758204 | PRJNA1067370_S_NODE_34_length_1303_cov_5.180488_g29_i0 | PRJNA1067370 | 34 | 1303 | 5.180488 | 67.50175864 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 2362 | 0 | NTclustered | gi|1276712381|gb|CP024701.1| | 2663009 | g29 | i0 | 99.386 | 476.28626247122 | 1303 | 8 | 100 | 0 | 1 | 1303 | 622394 | 621092 | Fusobacterium pseudoperiodonticum strain KCOM 1277 chromosome, complete genome | blastn | 620601 | 2362 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 20139681 | 20139681 | PRJNA1067370_P_NODE_35796_length_333_cov_0.923077_g35248_i0 | PRJNA1067370 | 35796 | 333 | 0.923077 | 3.07384641 | Leptotrichia | 32067 | Bacteria | Bacteria | 616 | 8.87e-172 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g35248 | i0 | 100 | 475.642642642643 | 333 | 0 | 100 | 0 | 1 | 333 | 2356 | 2024 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 158389 | 616 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 20582199 | 20582199 | PRJNA1067370_P_NODE_7637_length_649_cov_1.805556_g7112_i0 | PRJNA1067370 | 7637 | 649 | 1.805556 | 11.71805844 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 1138 | 0 | NTclustered | gi|1708577445|dbj|AP019835.1| | 157687 | g7112 | i0 | 98.305 | 426.941448382126 | 649 | 11 | 100 | 0 | 1 | 649 | 1779564 | 1778916 | Leptotrichia wadei JMUB3934 DNA, complete genome | blastn | 277085 | 1138 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 20582406 | 20582406 | PRJNA1067370_S_NODE_5617_length_251_cov_0.865169_g5591_i0 | PRJNA1067370 | 5617 | 251 | 0.865169 | 2.17157419 | Leptotrichia alba | 3239304 | Bacteria | Bacteria | 407 | 4.2099999999999995e-109 | NTclustered | gi|2785244533|gb|CP165647.1| | 3239304 | g5591 | i0 | 100 | 13.1673306772908 | 220 | 0 | 88 | 0 | 32 | 251 | 580885 | 581104 | Leptotrichia sp. HSP-536 chromosome, complete genome | blastn | 3305 | 407 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia alba | ||
| 20582408 | 20582408 | PRJNA1067370_S_NODE_97_length_976_cov_20.578073_g86_i0 | PRJNA1067370 | 97 | 976 | 20.578073 | 200.84199248 | Leptotrichia alba | 3239304 | Bacteria | Bacteria | 1694 | 0 | NTclustered | gi|2785244533|gb|CP165647.1| | 3239304 | g86 | i0 | 98.843 | 468.799180327869 | 951 | 9 | 97 | 2 | 1 | 951 | 2181768 | 2182716 | Leptotrichia sp. HSP-536 chromosome, complete genome | blastn | 457548 | 1694 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia alba | ||
| 21857825 | 21857825 | PRJNA1067370_P_NODE_65258_length_272_cov_1.160804_g64709_i0 | PRJNA1067370 | 65258 | 272 | 1.160804 | 3.15738688 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g64709 | i0 | 100 | 0.102941176470588 | 28 | 0 | 10 | 0 | 217 | 244 | 1962682 | 1962709 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 21858076 | 21858076 | PRJNA1067370_S_NODE_2778_length_323_cov_2.004000_g2752_i0 | PRJNA1067370 | 2778 | 323 | 2.004 | 6.47292 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 553 | 6.819999999999998e-153 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g2752 | i0 | 97.523 | 111.278637770898 | 323 | 8 | 100 | 0 | 1 | 323 | 51789 | 52111 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 35943 | 553 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;