RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA1067370" and tax_clade = "Marine Group I"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Marine Group I · 1 ✖

bioproject 1

  • PRJNA1067370 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
181131 181131 PRJNA1067370_P_NODE_77081_length_254_cov_1.464088_g76532_i0 PRJNA1067370 77081 254 1.464088 3.71878352 Marine Group I thaumarchaeote 2511932 Archaea Archaea 185 2.1799999999999994e-42   NTclustered gi|2277046463|gb|CP054849.1| 2511932 g76532 i0 87.654 23.1181102362205 162 16 63 4 91 250 242268 242427 MAG: Marine Group I thaumarchaeote isolate JZB445 chromosome blastn 5872 185 1 Archaea Marine Group I Thermoproteati Nitrososphaerota         Marine Group I thaumarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;